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GTDC1 glycosyltransferase like domain containing 1 [ Capra hircus (goat) ]

Gene ID: 102190740, updated on 1-Aug-2024

Summary

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Gene symbol
GTDC1
Gene description
glycosyltransferase like domain containing 1
See related
EnsemblRapid:ENSCHIG00000022649
Gene type
protein coding
RefSeq status
MODEL
Organism
Capra hircus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Capra
Orthologs
human mouse all
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Genomic context

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See GTDC1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
14
Annotation release Status Assembly Chr Location
102 current ASM170441v1 (GCF_001704415.1) 2 NC_030809.1 (83524315..83969888, complement)
101 previous assembly CHIR_1.0 (GCF_000317765.1) 2 NC_022294.1 (51685479..52062106)

Chromosome 2 - NC_030809.1Genomic Context describing neighboring genes Neighboring gene kynureninase Neighboring gene Rho GTPase activating protein 15 Neighboring gene uncharacterized LOC108638591 Neighboring gene zinc finger E-box binding homeobox 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycosyltransferase-like domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Capra hircus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM170441v1 Primary Assembly

Genomic

  1. NC_030809.1 Reference ASM170441v1 Primary Assembly

    Range
    83524315..83969888 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018062499.1 → XP_017917988.1  glycosyltransferase-like domain-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C2N5L8, A0AAJ7KTD4
    Related
    ENSCHIP00000026220.2, ENSCHIT00000034083.2

  2. XM_018062503.1 → XP_017917992.1  glycosyltransferase-like domain-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C2N5L8, A0AAJ7KTD4

  3. XM_018062522.1 → XP_017918011.1  glycosyltransferase-like domain-containing protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A8C2N6F0, A0AAJ7KVI8

  4. XM_018062508.1 → XP_017917997.1  glycosyltransferase-like domain-containing protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A452FPH2, A0A452FPS7
    Related
    ENSCHIP00000044196.1, ENSCHIT00000061257.1

  5. XM_005676178.3 → XP_005676235.1  glycosyltransferase-like domain-containing protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A8C2N6F0, A0AAJ7KVI8
    Conserved Domains (1) summary
    pfam12038
    Location:2 → 164
    DUF3524; Domain of unknown function (DUF3524)

  6. XM_013969881.2 → XP_013825335.1  glycosyltransferase-like domain-containing protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A452FPH2, A0A452FPS7
    Related
    ENSCHIP00000043003.1, ENSCHIT00000059583.1
    Conserved Domains (3) summary
    COG0438
    Location:237 → 445
    RfaB; Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]
    pfam12038
    Location:2 → 164
    DUF3524; Domain of unknown function (DUF3524)
    cl10013
    Location:288 → 377
    Glycosyltransferase_GTB_type; Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate ...
Nucleotide Protein
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