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ADARB1 adenosine deaminase RNA specific B1 [ Capra hircus (goat) ]

Gene ID: 102190269, updated on 1-Aug-2024

Summary

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Gene symbol
ADARB1
Gene description
adenosine deaminase RNA specific B1
See related
EnsemblRapid:ENSCHIG00000018259
Gene type
protein coding
RefSeq status
MODEL
Organism
Capra hircus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Capra
Orthologs
human mouse all
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Genomic context

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See ADARB1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
12
Annotation release Status Assembly Chr Location
102 current ASM170441v1 (GCF_001704415.1) 1 NC_030808.1 (144900016..144991569)
101 previous assembly CHIR_1.0 (GCF_000317765.1) 1 NC_022293.1 (142620225..142706978)

Chromosome 1 - NC_030808.1Genomic Context describing neighboring genes Neighboring gene integrin subunit beta 2 Neighboring gene SLX9 ribosome biogenesis factor Neighboring gene protein O-fucosyltransferase 2 Neighboring gene collagen type XVIII alpha 1 chain

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables double-stranded RNA adenosine deaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables double-stranded RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tRNA-specific adenosine deaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in RNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in adenosine to inosine editing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
double-stranded RNA-specific editase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Capra hircus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM170441v1 Primary Assembly

Genomic

  1. NC_030808.1 Reference ASM170441v1 Primary Assembly

    Range
    144900016..144991569
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018052170.1 → XP_017907659.1  double-stranded RNA-specific editase 1 isoform X3

    UniProtKB/TrEMBL
    A0AAJ7K8T7

  2. XM_018052159.1 → XP_017907648.1  double-stranded RNA-specific editase 1 isoform X1

    UniProtKB/TrEMBL
    A0AAJ7KAD1

  3. XM_018052182.1 → XP_017907671.1  double-stranded RNA-specific editase 1 isoform X4

    UniProtKB/TrEMBL
    A0AAJ7K9K3

  4. XM_018052163.1 → XP_017907652.1  double-stranded RNA-specific editase 1 isoform X2

    UniProtKB/TrEMBL
    A0A452F4M5, A0AAJ7NUM1
    Related
    ENSCHIP00000019119.2, ENSCHIT00000026933.2

RNA

  1. XR_001918452.1 RNA Sequence

    Related
    ENSCHIT00000057094.1
Nucleotide Protein
Heading Accession and Version

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