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PPT1 palmitoyl-protein thioesterase 1 [ Capra hircus (goat) ]

Gene ID: 102188105, updated on 10-Mar-2024

Summary

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Gene symbol
PPT1
Gene description
palmitoyl-protein thioesterase 1
See related
EnsemblRapid:ENSCHIG00000024964
Gene type
protein coding
RefSeq status
MODEL
Organism
Capra hircus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Capra
Orthologs
human mouse all
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Genomic context

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See PPT1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
9
Annotation release Status Assembly Chr Location
102 current ASM170441v1 (GCF_001704415.1) 3 NC_030810.1 (14769042..14785235, complement)
101 previous assembly CHIR_1.0 (GCF_000317765.1) 3 NC_022295.1 (102233153..102249367)

Chromosome 3 - NC_030810.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108635638 Neighboring gene cyclase associated actin cytoskeleton regulatory protein 1 Neighboring gene RLF zinc finger Neighboring gene transmembrane and coiled-coil domains 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables palmitoyl-(protein) hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nervous system development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein depalmitoylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in receptor-mediated endocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in lysosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
palmitoyl-protein thioesterase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Capra hircus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM170441v1 Primary Assembly

Genomic

  1. NC_030810.1 Reference ASM170441v1 Primary Assembly

    Range
    14769042..14785235 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005678644.3 → XP_005678701.1  palmitoyl-protein thioesterase 1

    UniProtKB/TrEMBL
    A0A452G0W3, A0A8C2N7A6
    Related
    ENSCHIP00000050038.1, ENSCHIT00000060927.1
    Conserved Domains (1) summary
    pfam02089
    Location:28 → 306
    Palm_thioest; Palmitoyl protein thioesterase
Nucleotide Protein
Heading Accession and Version

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