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CPT1A carnitine palmitoyltransferase 1A [ Capra hircus (goat) ]

Gene ID: 102187923, updated on 10-Mar-2024

Summary

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Gene symbol
CPT1A
Gene description
carnitine palmitoyltransferase 1A
See related
EnsemblRapid:ENSCHIG00000015344
Gene type
protein coding
RefSeq status
MODEL
Organism
Capra hircus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Capra
Orthologs
human mouse all
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Genomic context

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See CPT1A in Genome Data Viewer
Location:
chromosome: 29
Exon count:
19
Annotation release Status Assembly Chr Location
102 current ASM170441v1 (GCF_001704415.1) 29 NC_030836.1 (47200023..47260585, complement)
101 previous assembly CHIR_1.0 (GCF_000317765.1) 29 NC_022321.1 (43981711..44023349, complement)

Chromosome 29 - NC_030836.1Genomic Context describing neighboring genes Neighboring gene testis expressed metallothionein like protein Neighboring gene cytochrome c oxidase subunit 7B, mitochondrial pseudogene Neighboring gene mitochondrial ribosomal protein L21 Neighboring gene immunoglobulin mu DNA binding protein 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Characterization of Liaoning cashmere goat transcriptome: sequencing, de novo assembly, functional annotation and comparative analysis. Liu H, et al. PLoS One, 2013. PMID 24130835, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables carnitine O-palmitoyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carnitine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carnitine O-palmitoyltransferase 1, liver isoform

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Capra hircus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM170441v1 Primary Assembly

Genomic

  1. NC_030836.1 Reference ASM170441v1 Primary Assembly

    Range
    47200023..47260585 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018043311.1 → XP_017898800.1  carnitine O-palmitoyltransferase 1, liver isoform

    UniProtKB/TrEMBL
    A0A452EPY0, A0A452EQ21
    Related
    ENSCHIP00000014256.2, ENSCHIT00000022050.2
    Conserved Domains (2) summary
    pfam16484
    Location:1 → 46
    CPT_N; Carnitine O-palmitoyltransferase N-terminus
    pfam00755
    Location:171 → 761
    Carn_acyltransf; Choline/Carnitine o-acyltransferase
Nucleotide Protein
Heading Accession and Version

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