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HSD17B12 hydroxysteroid 17-beta dehydrogenase 12 [ Capra hircus (goat) ]

Gene ID: 102186887, updated on 10-Mar-2024

Summary

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Gene symbol
HSD17B12
Gene description
hydroxysteroid 17-beta dehydrogenase 12
See related
EnsemblRapid:ENSCHIG00000011795
Gene type
protein coding
RefSeq status
MODEL
Organism
Capra hircus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Capra
Orthologs
human mouse all
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Genomic context

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See HSD17B12 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
11
Annotation release Status Assembly Chr Location
102 current ASM170441v1 (GCF_001704415.1) 15 NC_030822.1 (9045285..9214313, complement)
101 previous assembly CHIR_1.0 (GCF_000317765.1) 15 NC_022307.1 (70044793..70213441)

Chromosome 15 - NC_030822.1Genomic Context describing neighboring genes Neighboring gene chromosome 15 C11orf96 homolog Neighboring gene alkB homolog 3, alpha-ketoglutarate dependent dioxygenase Neighboring gene transfer RNA glycine (anticodon UCC) Neighboring gene uncharacterized LOC102186613 Neighboring gene microRNA mir-129

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Characterization of Liaoning cashmere goat transcriptome: sequencing, de novo assembly, functional annotation and comparative analysis. Liu H, et al. PLoS One, 2013. PMID 24130835, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
very-long-chain 3-oxoacyl-CoA reductase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Capra hircus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM170441v1 Primary Assembly

Genomic

  1. NC_030822.1 Reference ASM170441v1 Primary Assembly

    Range
    9045285..9214313 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005690127.3 → XP_005690184.1  very-long-chain 3-oxoacyl-CoA reductase

    UniProtKB/TrEMBL
    A0A452E9L6, A0A452EA13
    Related
    ENSCHIP00000008711.1, ENSCHIT00000016474.2
    Conserved Domains (3) summary
    cd05356
    Location:50 → 289
    17beta-HSD1_like_SDR_c; 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs
    COG0300
    Location:46 → 300
    DltE; Short-chain dehydrogenase [General function prediction only]
    cl21454
    Location:11 → 84
    NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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