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SPATS2L spermatogenesis associated serine rich 2 like [ Capra hircus (goat) ]

Gene ID: 102186063, updated on 1-Aug-2024

Summary

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Gene symbol
SPATS2L
Gene description
spermatogenesis associated serine rich 2 like
See related
EnsemblRapid:ENSCHIG00000026377
Gene type
protein coding
RefSeq status
MODEL
Organism
Capra hircus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Capra
Orthologs
human mouse all
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Genomic context

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See SPATS2L in Genome Data Viewer
Location:
chromosome: 2
Exon count:
18
Annotation release Status Assembly Chr Location
102 current ASM170441v1 (GCF_001704415.1) 2 NC_030809.1 (46916414..47100426, complement)
101 previous assembly CHIR_1.0 (GCF_000317765.1) 2 NC_022294.1 (88161268..88321417)

Chromosome 2 - NC_030809.1Genomic Context describing neighboring genes Neighboring gene shugoshin 2 Neighboring gene potassium channel tetramerization domain containing 18 Neighboring gene transfer RNA cysteine (anticodon GCA) Neighboring gene uncharacterized LOC106503086 Neighboring gene matrix AAA peptidase interacting protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
SPATS2-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Capra hircus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM170441v1 Primary Assembly

Genomic

  1. NC_030809.1 Reference ASM170441v1 Primary Assembly

    Range
    46916414..47100426 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018061185.1 → XP_017916674.1  SPATS2-like protein isoform X2

    UniProtKB/TrEMBL
    A0A452G7I7, A0A452G7U1

  2. XM_018061203.1 → XP_017916692.1  SPATS2-like protein isoform X4

    UniProtKB/TrEMBL
    A0A452G7I2, A0A8C2NKR9
    Related
    ENSCHIP00000032380.2, ENSCHIT00000040255.2

  3. XM_018061179.1 → XP_017916668.1  SPATS2-like protein isoform X2

    UniProtKB/TrEMBL
    A0A452G7I7, A0A452G7U1

  4. XM_018061193.1 → XP_017916682.1  SPATS2-like protein isoform X2

    UniProtKB/TrEMBL
    A0A452G7I7, A0A452G7U1

  5. XM_018061194.1 → XP_017916683.1  SPATS2-like protein isoform X2

    UniProtKB/TrEMBL
    A0A452G7I7, A0A452G7U1

  6. XM_018061196.1 → XP_017916685.1  SPATS2-like protein isoform X2

    UniProtKB/TrEMBL
    A0A452G7I7, A0A452G7U1
    Related
    ENSCHIP00000032551.2, ENSCHIT00000040426.2

  7. XM_018061174.1 → XP_017916663.1  SPATS2-like protein isoform X1

    UniProtKB/TrEMBL
    A0A452G7U1, A0AAJ7KSN2

  8. XM_018061200.1 → XP_017916689.1  SPATS2-like protein isoform X3

    UniProtKB/TrEMBL
    A0A8C2NKR9, A0AAJ7KQW2
Nucleotide Protein
Heading Accession and Version

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