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SMPD2 sphingomyelin phosphodiesterase 2 [ Capra hircus (goat) ]

Gene ID: 102186017, updated on 10-Mar-2024

Summary

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Gene symbol
SMPD2
Gene description
sphingomyelin phosphodiesterase 2
See related
EnsemblRapid:ENSCHIG00000022563
Gene type
protein coding
RefSeq status
MODEL
Organism
Capra hircus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Capra
Orthologs
human mouse all
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Genomic context

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See SMPD2 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
10
Annotation release Status Assembly Chr Location
102 current ASM170441v1 (GCF_001704415.1) 9 NC_030816.1 (28019378..28022352, complement)
101 previous assembly CHIR_1.0 (GCF_000317765.1) 9 NC_022301.1 (27809822..27812624, complement)

Chromosome 9 - NC_030816.1Genomic Context describing neighboring genes Neighboring gene zinc finger and BTB domain containing 24 Neighboring gene microtubule associated monooxygenase, calponin and LIM domain containing 1 Neighboring gene peptidylprolyl isomerase like 6 Neighboring gene CD164 molecule

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sphingomyelin phosphodiesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sphingomyelin phosphodiesterase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Capra hircus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM170441v1 Primary Assembly

Genomic

  1. NC_030816.1 Reference ASM170441v1 Primary Assembly

    Range
    28019378..28022352 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013966440.2 → XP_013821894.1  sphingomyelin phosphodiesterase 2

    UniProtKB/TrEMBL
    A0A452FP12
    Related
    ENSCHIP00000026051.1, ENSCHIT00000033913.2
    Conserved Domains (1) summary
    cl00490
    Location:14 → 279
    EEP; Exonuclease-Endonuclease-Phosphatase (EEP) domain superfamily
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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