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YAF2 YY1 associated factor 2 [ Capra hircus (goat) ]

Gene ID: 102185341, updated on 10-Mar-2024

Summary

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Gene symbol
YAF2
Gene description
YY1 associated factor 2
See related
EnsemblRapid:ENSCHIG00000025941
Gene type
protein coding
RefSeq status
MODEL
Organism
Capra hircus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Capra
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
6
Annotation release Status Assembly Chr Location
102 current ASM170441v1 (GCF_001704415.1) 5 NC_030812.1 (37955451..38031231)
101 previous assembly CHIR_1.0 (GCF_000317765.1) 5 NC_022297.1 (37187316..37237374)

Chromosome 5 - NC_030812.1Genomic Context describing neighboring genes Neighboring gene zinc finger CCHC-type and RNA binding motif containing 1 Neighboring gene tigger transposable element-derived protein 1-like Neighboring gene glucoside xylosyltransferase 1 Neighboring gene splicing factor 45-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coregulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
YY1-associated factor 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Capra hircus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM170441v1 Primary Assembly

Genomic

  1. NC_030812.1 Reference ASM170441v1 Primary Assembly

    Range
    37955451..38031231
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018047913.1 → XP_017903402.1  YY1-associated factor 2 isoform X1

    UniProtKB/TrEMBL
    A0A452G561
    Related
    ENSCHIP00000031684.1, ENSCHIT00000039558.1
    Conserved Domains (3) summary
    sd00029
    Location:23 → 42
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    pfam00641
    Location:20 → 43
    zf-RanBP; Zn-finger in Ran binding protein and others
    pfam17219
    Location:102 → 134
    YAF2_RYBP; Yaf2/RYBP C-terminal binding motif

  2. XM_018047914.1 → XP_017903403.1  YY1-associated factor 2 isoform X2

    UniProtKB/TrEMBL
    A0A452G5B5
    Related
    ENSCHIP00000031681.1, ENSCHIT00000039555.1

RNA

  1. XR_001918052.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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