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GAR1 GAR1 ribonucleoprotein [ Capra hircus (goat) ]

Gene ID: 102183221, updated on 1-Aug-2024

Summary

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Gene symbol
GAR1
Gene description
GAR1 ribonucleoprotein
See related
EnsemblRapid:ENSCHIG00000016026
Gene type
protein coding
RefSeq status
MODEL
Organism
Capra hircus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Capra
Orthologs
human mouse all
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Genomic context

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See GAR1 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
8
Annotation release Status Assembly Chr Location
102 current ASM170441v1 (GCF_001704415.1) 6 NC_030813.1 (15899301..15907065, complement)
101 previous assembly CHIR_1.0 (GCF_000317765.1) 6 NC_022298.1 (14040676..14048500, complement)

Chromosome 6 - NC_030813.1Genomic Context describing neighboring genes Neighboring gene leucine rich repeat, Ig-like and transmembrane domains 3 Neighboring gene retinal pigment epithelium-derived rhodopsin homolog Neighboring gene complement factor I Neighboring gene uncharacterized LOC108636204 Neighboring gene phospholipase A2 group XIIA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables box H/ACA snoRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ribosome biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in snoRNA guided rRNA pseudouridine synthesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of box H/ACA snoRNP complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
H/ACA ribonucleoprotein complex subunit 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Capra hircus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM170441v1 Primary Assembly

Genomic

  1. NC_030813.1 Reference ASM170441v1 Primary Assembly

    Range
    15899301..15907065 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005681312.3 → XP_005681369.2  H/ACA ribonucleoprotein complex subunit 1

    UniProtKB/TrEMBL
    A0AAJ6S2W0

  2. XM_005681313.2 → XP_005681370.2  H/ACA ribonucleoprotein complex subunit 1

    UniProtKB/TrEMBL
    A0AAJ6S2W0
    Related
    ENSCHIP00000015336.2, ENSCHIT00000023138.2
Nucleotide Protein
Heading Accession and Version

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