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NPM1 nucleophosmin 1 [ Capra hircus (goat) ]

Gene ID: 102181461, updated on 1-Aug-2024

Summary

Gene symbol
NPM1
Gene description
nucleophosmin 1
See related
EnsemblRapid:ENSCHIG00000013986
Gene type
protein coding
RefSeq status
MODEL
Organism
Capra hircus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Capra
Orthologs
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Genomic context

See NPM1 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
12
Annotation release Status Assembly Chr Location
102 current ASM170441v1 (GCF_001704415.1) 20 NC_030827.1 (3263173..3276952)
101 previous assembly CHIR_1.0 (GCF_000317765.1) 25 NC_022317.1 (26053585..26054919)

Chromosome 20 - NC_030827.1Genomic Context describing neighboring genes Neighboring gene RAN binding protein 17 Neighboring gene uncharacterized LOC106503304 Neighboring gene T cell leukemia homeobox 3 Neighboring gene fibroblast growth factor 18 Neighboring gene small integral membrane protein 23

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
PubMed 
enables chromatin binding IEA
Inferred from Electronic Annotation
more info
PubMed 
enables histone binding IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in centrosome IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
PubMed 
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
PubMed 

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Capra hircus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM170441v1 Primary Assembly

Genomic

  1. NC_030827.1 Reference ASM170441v1 Primary Assembly

    Range
    3263173..3276952
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013972697.2XP_013828151.2  nucleophosmin isoform X1

    UniProtKB/TrEMBL
    A0A452EJ02, A0AAJ7A529
  2. XM_013972698.2XP_013828152.2  nucleophosmin isoform X2

    UniProtKB/TrEMBL
    A0A452EJ02, A0AAJ7A4P5
    Related
    ENSCHIP00000012089.2, ENSCHIT00000019879.2
  3. XM_013972699.2XP_013828153.2  nucleophosmin isoform X3

    UniProtKB/TrEMBL
    A0A452EJ02, A0AAJ7A4N6
  4. XM_013972700.2XP_013828154.2  nucleophosmin isoform X4

    UniProtKB/TrEMBL
    A0A452EJ02, A0AAJ7A4Q4
    Related
    ENSCHIP00000012084.2, ENSCHIT00000019874.2