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ADAT1 adenosine deaminase tRNA specific 1 [ Capra hircus (goat) ]

Gene ID: 102176155, updated on 1-Aug-2024

Summary

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Gene symbol
ADAT1
Gene description
adenosine deaminase tRNA specific 1
See related
EnsemblRapid:ENSCHIG00000022974
Gene type
protein coding
RefSeq status
MODEL
Organism
Capra hircus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Capra
Orthologs
human mouse all
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Genomic context

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See ADAT1 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
15
Annotation release Status Assembly Chr Location
102 current ASM170441v1 (GCF_001704415.1) 18 NC_030825.1 (4119043..4153788, complement)
101 previous assembly CHIR_1.0 (GCF_000317765.1) 18 NC_022310.1 (2288194..2322851, complement)

Chromosome 18 - NC_030825.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 231 Neighboring gene GABA type A receptor associated protein like 2 Neighboring gene uncharacterized LOC108637951 Neighboring gene lysyl-tRNA synthetase 1 Neighboring gene phosphatidylethanolamine-binding protein 1 Neighboring gene TERF2 interacting protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables adenosine deaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in RNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tRNA-specific adenosine deaminase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Capra hircus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM170441v1 Primary Assembly

Genomic

  1. NC_030825.1 Reference ASM170441v1 Primary Assembly

    Range
    4119043..4153788 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018061732.1 → XP_017917221.1  tRNA-specific adenosine deaminase 1 isoform X3

    UniProtKB/TrEMBL
    A0A452FRC6, A0AAJ7P3Q4
    Related
    ENSCHIP00000039911.1, ENSCHIT00000046696.1

  2. XM_005691807.3 → XP_005691864.2  tRNA-specific adenosine deaminase 1 isoform X1

    UniProtKB/TrEMBL
    A0A452FRC6, A0AAJ6S9K2

  3. XM_018061733.1 → XP_017917222.1  tRNA-specific adenosine deaminase 1 isoform X3

    UniProtKB/TrEMBL
    A0A452FRC6, A0AAJ7P3Q4

  4. XM_018061734.1 → XP_017917223.1  tRNA-specific adenosine deaminase 1 isoform X4

    UniProtKB/TrEMBL
    A0A452FRC6, A0AAJ7P3K3
    Related
    ENSCHIP00000026755.2, ENSCHIT00000034620.2

  5. XM_005691810.3 → XP_005691867.2  tRNA-specific adenosine deaminase 1 isoform X2

    UniProtKB/TrEMBL
    A0A452FRC6, A0AAJ6SA40
    Related
    ENSCHIP00000035699.1, ENSCHIT00000056145.1

  6. XM_005691812.3 → XP_005691869.2  tRNA-specific adenosine deaminase 1 isoform X5

    UniProtKB/TrEMBL
    A0A452FRC6, A0AAJ6S9Y6
    Related
    ENSCHIP00000042656.1, ENSCHIT00000046361.1
Nucleotide Protein
Heading Accession and Version

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