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UXS1 UDP-glucuronate decarboxylase 1 [ Capra hircus (goat) ]

Gene ID: 102175965, updated on 1-Aug-2024

Summary

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Gene symbol
UXS1
Gene description
UDP-glucuronate decarboxylase 1
See related
EnsemblRapid:ENSCHIG00000023307
Gene type
protein coding
RefSeq status
MODEL
Organism
Capra hircus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Capra
Orthologs
human mouse all
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Genomic context

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See UXS1 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
16
Annotation release Status Assembly Chr Location
102 current ASM170441v1 (GCF_001704415.1) 11 NC_030818.1 (45306264..45362957)
101 previous assembly CHIR_1.0 (GCF_000317765.1) 11 NC_022303.1 (45177097..45220945)

Chromosome 11 - NC_030818.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L9 pseudogene Neighboring gene E3 ubiquitin-protein ligase makorin-1-like Neighboring gene transcription factor BTF3 pseudogene Neighboring gene ECRG4 augurin precursor

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD+ binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables UDP-glucuronate decarboxylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in D-xylose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-glucuronic acid decarboxylase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Capra hircus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM170441v1 Primary Assembly

Genomic

  1. NC_030818.1 Reference ASM170441v1 Primary Assembly

    Range
    45306264..45362957
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018055320.1 → XP_017910809.1  UDP-glucuronic acid decarboxylase 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C2XZY0, A0AAJ7KES0
    Related
    ENSCHIP00000027401.2, ENSCHIT00000035269.2
    Conserved Domains (2) summary
    cd05230
    Location:94 → 397
    UGD_SDR_e; UDP-glucuronate decarboxylase (UGD) and related proteins, extended (e) SDRs
    pfam11803
    Location:6 → 83
    UXS1_N; UDP-glucuronate decarboxylase N-terminal

  2. XM_018055321.1 → XP_017910810.1  UDP-glucuronic acid decarboxylase 1 isoform X2

    UniProtKB/TrEMBL
    A0A452FSN2, A0A8C2XZY0
    Related
    ENSCHIP00000054895.1, ENSCHIT00000044198.1
    Conserved Domains (2) summary
    cd05230
    Location:89 → 392
    UGD_SDR_e; UDP-glucuronate decarboxylase (UGD) and related proteins, extended (e) SDRs
    pfam11803
    Location:6 → 78
    UXS1_N; UDP-glucuronate decarboxylase N-terminal

  3. XM_005686658.3 → XP_005686715.1  UDP-glucuronic acid decarboxylase 1 isoform X3

    See identical proteins and their annotated locations for XP_005686715.1

    UniProtKB/TrEMBL
    A0AAJ6WMA8
    Conserved Domains (2) summary
    cd05230
    Location:1 → 284
    UGD_SDR_e; UDP-glucuronate decarboxylase (UGD) and related proteins, extended (e) SDRs
    COG0451
    Location:3 → 288
    WcaG; Nucleoside-diphosphate-sugar epimerase [Cell wall/membrane/envelope biogenesis]
Nucleotide Protein
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