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CHPT1 choline phosphotransferase 1 [ Capra hircus (goat) ]

Gene ID: 102175100, updated on 1-Aug-2024

Summary

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Gene symbol
CHPT1
Gene description
choline phosphotransferase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Capra hircus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Capra
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
9
Annotation release Status Assembly Chr Location
102 current ASM170441v1 (GCF_001704415.1) 5 NC_030812.1 (64162443..64190773)
101 previous assembly CHIR_1.0 (GCF_000317765.1) 5 NC_022297.1 (63347597..63373252)

Chromosome 5 - NC_030812.1Genomic Context describing neighboring genes Neighboring gene Spi-C transcription factor Neighboring gene myosin binding protein C1 Neighboring gene synaptonemal complex protein 3 Neighboring gene N-acetylglucosamine-1-phosphate transferase subunits alpha and beta Neighboring gene DNA damage regulated autophagy modulator 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables diacylglycerol cholinephosphotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ethanolaminephosphotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylethanolamine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cholinephosphotransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Capra hircus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM170441v1 Primary Assembly

Genomic

  1. NC_030812.1 Reference ASM170441v1 Primary Assembly

    Range
    64162443..64190773
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018048172.1 → XP_017903661.1  cholinephosphotransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A452E218
    Conserved Domains (1) summary
    cl00453
    Location:25 → 229
    CDP-OH_P_transf; CDP-alcohol phosphatidyltransferase

  2. XM_018048173.1 → XP_017903662.1  cholinephosphotransferase 1 isoform X2

    UniProtKB/TrEMBL
    A0AAJ7NQU3

  3. XM_018048174.1 → XP_017903663.1  cholinephosphotransferase 1 isoform X3

    UniProtKB/TrEMBL
    A0AAJ7NQN0

RNA

  1. XR_001918078.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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