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RBMX RNA binding motif protein X-linked [ Capra hircus (goat) ]

Gene ID: 102173272, updated on 10-Mar-2024

Summary

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Gene symbol
RBMX
Gene description
RNA binding motif protein X-linked
See related
EnsemblRapid:ENSCHIG00000013601
Gene type
protein coding
RefSeq status
MODEL
Organism
Capra hircus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Capra
Orthologs
human mouse all
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Genomic context

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See RBMX in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
102 current ASM170441v1 (GCF_001704415.1) Unplaced Scaffold NW_017189539.1 (64969..73711)
101 previous assembly CHIR_1.0 (GCF_000317765.1) X NC_022322.1 (39485880..39494634, complement)

NW_017189539.1Genomic Context describing neighboring genes Neighboring gene transmembrane 9 superfamily member 2-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of spliceosomal complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RNA-binding motif protein, X chromosome

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Capra hircus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM170441v1 Primary Assembly

Genomic

  1. NW_017189539.1 Reference ASM170441v1 Primary Assembly

    Range
    64969..73711
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018044429.1 → XP_017899918.1  RNA-binding motif protein, X chromosome

    UniProtKB/TrEMBL
    A0A452EHS0, A0A452EHT0
    Conserved Domains (3) summary
    PRK14086
    Location:165 → 306
    dnaA; chromosomal replication initiator protein DnaA
    pfam08081
    Location:173 → 217
    RBM1CTR; RBM1CTR (NUC064) family
    cd12382
    Location:7 → 86
    RRM_RBMX_like; RNA recognition motif (RRM) found in heterogeneous nuclear ribonucleoprotein G (hnRNP G), Y chromosome RNA recognition motif 1 (hRBMY), testis-specific heterogeneous nuclear ribonucleoprotein G-T (hnRNP G-T) and similar proteins

  2. XM_018044431.1 → XP_017899920.1  RNA-binding motif protein, X chromosome

    UniProtKB/TrEMBL
    A0A452EHS0, A0A452EHT0
    Conserved Domains (3) summary
    PRK14086
    Location:165 → 306
    dnaA; chromosomal replication initiator protein DnaA
    pfam08081
    Location:173 → 217
    RBM1CTR; RBM1CTR (NUC064) family
    cd12382
    Location:7 → 86
    RRM_RBMX_like; RNA recognition motif (RRM) found in heterogeneous nuclear ribonucleoprotein G (hnRNP G), Y chromosome RNA recognition motif 1 (hRBMY), testis-specific heterogeneous nuclear ribonucleoprotein G-T (hnRNP G-T) and similar proteins

  3. XM_005709619.3 → XP_005709676.3  RNA-binding motif protein, X chromosome

    UniProtKB/TrEMBL
    A0A452EHS0, A0A452EHT0
    Related
    ENSCHIP00000011466.2, ENSCHIT00000019255.2
    Conserved Domains (3) summary
    PRK14086
    Location:165 → 306
    dnaA; chromosomal replication initiator protein DnaA
    pfam08081
    Location:173 → 217
    RBM1CTR; RBM1CTR (NUC064) family
    cd12382
    Location:7 → 86
    RRM_RBMX_like; RNA recognition motif (RRM) found in heterogeneous nuclear ribonucleoprotein G (hnRNP G), Y chromosome RNA recognition motif 1 (hRBMY), testis-specific heterogeneous nuclear ribonucleoprotein G-T (hnRNP G-T) and similar proteins
Nucleotide Protein
Heading Accession and Version

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