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SLC27A5 solute carrier family 27 member 5 [ Capra hircus (goat) ]

Gene ID: 102172839, updated on 1-Aug-2024

Summary

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Gene symbol
SLC27A5
Gene description
solute carrier family 27 member 5
See related
EnsemblRapid:ENSCHIG00000001672
Gene type
protein coding
RefSeq status
MODEL
Organism
Capra hircus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Capra
Orthologs
human mouse all
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Genomic context

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See SLC27A5 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
10
Annotation release Status Assembly Chr Location
102 current ASM170441v1 (GCF_001704415.1) 18 NC_030825.1 (67159837..67168684, complement)
101 previous assembly CHIR_1.0 (GCF_000317765.1) 18 NC_022310.1 (60964475..60973372, complement)

Chromosome 18 - NC_030825.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 324A Neighboring gene zinc finger protein 446 Neighboring gene zinc finger and BTB domain containing 45 Neighboring gene tripartite motif containing 28

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables fatty acid transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables long-chain fatty acid transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables long-chain fatty acid-CoA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in bile acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ketone body biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in long-chain fatty acid import across plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in triglyceride mobilization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in very long-chain fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
bile acyl-CoA synthetase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Capra hircus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM170441v1 Primary Assembly

Genomic

  1. NC_030825.1 Reference ASM170441v1 Primary Assembly

    Range
    67159837..67168684 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018063528.1 → XP_017919017.1  bile acyl-CoA synthetase isoform X1

    UniProtKB/TrEMBL
    A0A452DN39, A0A8C2PDZ5
    Related
    ENSCHIP00000001178.1, ENSCHIT00000003006.1

  2. XM_018063529.1 → XP_017919018.1  bile acyl-CoA synthetase isoform X2

    UniProtKB/TrEMBL
    A0AAJ7KX80
Nucleotide Protein
Heading Accession and Version

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