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SFTPC surfactant protein C [ Capra hircus (goat) ]

Gene ID: 102172442, updated on 1-Aug-2024

Summary

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Gene symbol
SFTPC
Gene description
surfactant protein C
See related
EnsemblRapid:ENSCHIG00000023198
Gene type
protein coding
RefSeq status
MODEL
Organism
Capra hircus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Capra
Orthologs
human mouse all
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Genomic context

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See SFTPC in Genome Data Viewer
Location:
chromosome: 8
Exon count:
6
Annotation release Status Assembly Chr Location
102 current ASM170441v1 (GCF_001704415.1) 8 NC_030815.1 (69143937..69147016)
101 previous assembly CHIR_1.0 (GCF_000317765.1) 8 NC_022300.1 (67704686..67711744)

Chromosome 8 - NC_030815.1Genomic Context describing neighboring genes Neighboring gene receptor accessory protein 4 Neighboring gene leucine rich repeat LGI family member 3 Neighboring gene bone morphogenetic protein 1 Neighboring gene phytanoyl-CoA 2-hydroxylase interacting protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in respiratory gaseous exchange by respiratory system IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in alveolar lamellar body IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pulmonary surfactant-associated protein C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Capra hircus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM170441v1 Primary Assembly

Genomic

  1. NC_030815.1 Reference ASM170441v1 Primary Assembly

    Range
    69143937..69147016
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005683986.2 → XP_005684043.1  pulmonary surfactant-associated protein C isoform X2

    UniProtKB/TrEMBL
    A0A452F6D6, A0AAJ6S3T5
    Related
    ENSCHIP00000019719.1, ENSCHIT00000027536.1
    Conserved Domains (3) summary
    smart00019
    Location:10 → 198
    SF_P; Pulmonary surfactant proteins
    smart01039
    Location:103 → 198
    BRICHOS; The BRICHOS domain is found in a variety of proteins implicated in dementia, respiratory distress and cancer
    pfam08999
    Location:10 → 102
    SP_C-Propep; Surfactant protein C, N terminal propeptide

  2. XM_018052283.1 → XP_017907772.1  pulmonary surfactant-associated protein C isoform X1

    UniProtKB/TrEMBL
    A0AAJ7NUR1

  3. XM_018052284.1 → XP_017907773.1  pulmonary surfactant-associated protein C isoform X3

    UniProtKB/TrEMBL
    A0AAJ7NUJ9
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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