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NUP153 nucleoporin 153 [ Capra hircus (goat) ]

Gene ID: 102171943, updated on 1-Aug-2024

Summary

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Gene symbol
NUP153
Gene description
nucleoporin 153
See related
EnsemblRapid:ENSCHIG00000023764
Gene type
protein coding
RefSeq status
MODEL
Organism
Capra hircus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Capra
Orthologs
human mouse all
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Genomic context

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See NUP153 in Genome Data Viewer
Location:
chromosome: 23
Exon count:
22
Annotation release Status Assembly Chr Location
102 current ASM170441v1 (GCF_001704415.1) 23 NC_030830.1 (10549000..10616598, complement)
101 previous assembly CHIR_1.0 (GCF_000317765.1) 23 NC_022315.1 (36905898..36963131)

Chromosome 23 - NC_030830.1Genomic Context describing neighboring genes Neighboring gene eukaryotic translation initiation factor 3 subunit F Neighboring gene family with sequence similarity 8 member A1 Neighboring gene uncharacterized LOC106503510 Neighboring gene kinesin family member 13A Neighboring gene NHL repeat containing E3 ubiquitin protein ligase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Characterization of Liaoning cashmere goat transcriptome: sequencing, de novo assembly, functional annotation and comparative analysis. Liu H, et al. PLoS One, 2013. PMID 24130835, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nuclear localization sequence binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of nuclear pore IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in RNA export from nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein import into nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of nuclear pore IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nuclear pore complex protein Nup153

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Capra hircus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM170441v1 Primary Assembly

Genomic

  1. NC_030830.1 Reference ASM170441v1 Primary Assembly

    Range
    10549000..10616598 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018038724.1 → XP_017894213.1  nuclear pore complex protein Nup153

    UniProtKB/TrEMBL
    A0A452FV25, A0AAJ7JIR5
    Related
    ENSCHIP00000037354.1, ENSCHIT00000048897.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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