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XRN2 5'-3' exoribonuclease 2 [ Capra hircus (goat) ]

Gene ID: 102171526, updated on 1-Aug-2024

Summary

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Gene symbol
XRN2
Gene description
5'-3' exoribonuclease 2
See related
EnsemblRapid:ENSCHIG00000006921
Gene type
protein coding
RefSeq status
MODEL
Organism
Capra hircus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Capra
Orthologs
human mouse all
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Genomic context

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See XRN2 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
30
Annotation release Status Assembly Chr Location
102 current ASM170441v1 (GCF_001704415.1) 13 NC_030820.1 (39970963..40037535)
101 previous assembly CHIR_1.0 (GCF_000317765.1) 13 NC_022305.1 (39140429..39193290)

Chromosome 13 - NC_030820.1Genomic Context describing neighboring genes Neighboring gene kizuna centrosomal protein Neighboring gene S-phase kinase-associated protein 2-like Neighboring gene dual specificity protein phosphatase 12-like Neighboring gene NK2 homeobox 4 Neighboring gene NK2 homeobox 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 5'-3' RNA exonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nuclear-transcribed mRNA catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
5'-3' exoribonuclease 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Capra hircus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM170441v1 Primary Assembly

Genomic

  1. NC_030820.1 Reference ASM170441v1 Primary Assembly

    Range
    39970963..40037535
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018057268.1 → XP_017912757.1  5'-3' exoribonuclease 2 isoform X1

    UniProtKB/TrEMBL
    A0A452DTJ8, A0A452DTY1
    Related
    ENSCHIP00000003157.2, ENSCHIT00000009484.2

  2. XM_018057269.1 → XP_017912758.1  5'-3' exoribonuclease 2 isoform X2

    UniProtKB/TrEMBL
    A0A452DTY1, A0AAJ7KIG3
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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