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TGDS TDP-glucose 4,6-dehydratase [ Capra hircus (goat) ]

Gene ID: 102170331, updated on 1-Aug-2024

Summary

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Gene symbol
TGDS
Gene description
TDP-glucose 4,6-dehydratase
See related
EnsemblRapid:ENSCHIG00000024188
Gene type
protein coding
RefSeq status
MODEL
Organism
Capra hircus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Capra
Orthologs
human mouse all
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Genomic context

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See TGDS in Genome Data Viewer
Location:
chromosome: 12
Exon count:
14
Annotation release Status Assembly Chr Location
102 current ASM170441v1 (GCF_001704415.1) 12 NC_030819.1 (16963040..16985727)
101 previous assembly CHIR_1.0 (GCF_000317765.1) 12 NC_022304.1 (66707705..66729038, complement)

Chromosome 12 - NC_030819.1Genomic Context describing neighboring genes Neighboring gene SRY-box transcription factor 21 Neighboring gene G protein-coupled receptor 180 Neighboring gene transfer RNA phenylalanine (anticodon GAA) Neighboring gene dopachrome tautomerase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dTDP-glucose 4,6-dehydratase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nucleotide-sugar metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dTDP-D-glucose 4,6-dehydratase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Capra hircus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM170441v1 Primary Assembly

Genomic

  1. NC_030819.1 Reference ASM170441v1 Primary Assembly

    Range
    16963040..16985727
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013968319.2 → XP_013823773.1  dTDP-D-glucose 4,6-dehydratase isoform X3

    UniProtKB/TrEMBL
    A0A8C2R3U0, A0AAJ7A2Y3
    Conserved Domains (1) summary
    cd05246
    Location:1 → 304
    dTDP_GD_SDR_e; dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs

  2. XM_005687701.3 → XP_005687758.1  dTDP-D-glucose 4,6-dehydratase isoform X1

    UniProtKB/TrEMBL
    A0A452FWY8, A0A8C2R3E1
    Related
    ENSCHIP00000053796.1, ENSCHIT00000047355.1
    Conserved Domains (1) summary
    cd05246
    Location:18 → 336
    dTDP_GD_SDR_e; dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs

  3. XM_013968318.2 → XP_013823772.1  dTDP-D-glucose 4,6-dehydratase isoform X2

    UniProtKB/TrEMBL
    A0A8C2R3E1, A0AAJ7A2J5
    Conserved Domains (1) summary
    cd05246
    Location:18 → 313
    dTDP_GD_SDR_e; dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs
Nucleotide Protein
Heading Accession and Version

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