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CERS3 ceramide synthase 3 [ Capra hircus (goat) ]

Gene ID: 102169911, updated on 10-Mar-2024

Summary

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Gene symbol
CERS3
Gene description
ceramide synthase 3
See related
EnsemblRapid:ENSCHIG00000009033
Gene type
protein coding
RefSeq status
MODEL
Organism
Capra hircus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Capra
Orthologs
human mouse all
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Genomic context

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See CERS3 in Genome Data Viewer
Location:
chromosome: 21
Exon count:
11
Annotation release Status Assembly Chr Location
102 current ASM170441v1 (GCF_001704415.1) 21 NC_030828.1 (5329860..5487343)
101 previous assembly CHIR_1.0 (GCF_000317765.1) 21 NC_022313.1 (4120132..4275687)

Chromosome 21 - NC_030828.1Genomic Context describing neighboring genes Neighboring gene ankyrin repeat and SOCS box containing 7 Neighboring gene lines homolog 1 Neighboring gene 40S ribosomal protein S3-like Neighboring gene ADAM metallopeptidase with thrombospondin type 1 motif 17

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Characterization of Liaoning cashmere goat transcriptome: sequencing, de novo assembly, functional annotation and comparative analysis. Liu H, et al. PLoS One, 2013. PMID 24130835, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sphingosine N-acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ceramide synthase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Capra hircus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM170441v1 Primary Assembly

Genomic

  1. NC_030828.1 Reference ASM170441v1 Primary Assembly

    Range
    5329860..5487343
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005694924.3 → XP_005694981.2  ceramide synthase 3

    UniProtKB/TrEMBL
    A0A452G378, A0A8C2PE02
    Related
    ENSCHIP00000050247.1, ENSCHIT00000043394.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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