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G3BP1 G3BP stress granule assembly factor 1 [ Capra hircus (goat) ]

Gene ID: 102169097, updated on 1-Aug-2024

Summary

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Gene symbol
G3BP1
Gene description
G3BP stress granule assembly factor 1
See related
EnsemblRapid:ENSCHIG00000015936
Gene type
protein coding
RefSeq status
MODEL
Organism
Capra hircus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Capra
Orthologs
human mouse all
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Genomic context

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See G3BP1 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
14
Annotation release Status Assembly Chr Location
102 current ASM170441v1 (GCF_001704415.1) 7 NC_030814.1 (47394167..47428634, complement)
101 previous assembly CHIR_1.0 (GCF_000317765.1) 7 NC_022299.1 (59241168..59272494)

Chromosome 7 - NC_030814.1Genomic Context describing neighboring genes Neighboring gene profilin-1 pseudogene Neighboring gene glycine receptor alpha 1 Neighboring gene antioxidant 1 copper chaperone Neighboring gene secreted protein acidic and cysteine rich

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ras GTPase-activating protein-binding protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Capra hircus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM170441v1 Primary Assembly

Genomic

  1. NC_030814.1 Reference ASM170441v1 Primary Assembly

    Range
    47394167..47428634 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005683197.2 → XP_005683254.1  ras GTPase-activating protein-binding protein 1 isoform X2

    See identical proteins and their annotated locations for XP_005683254.1

    UniProtKB/TrEMBL
    A0A452ESU0
    Conserved Domains (4) summary
    pfam06390
    Location:163 → 319
    NESP55; Neuroendocrine-specific golgi protein P55 (NESP55)
    COG0724
    Location:267 → 419
    RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
    cd00780
    Location:7 → 135
    NTF2; Nuclear transport factor 2 (NTF2) domain plays an important role in the trafficking of macromolecules, ions and small molecules between the cytoplasm and nucleus. This bi-directional transport of macromolecules across the nuclear envelope requires many ...
    cd12463
    Location:336 → 415
    RRM_G3BP1; RNA recognition motif found in ras GTPase-activating protein-binding protein 1 (G3BP1) and similar proteins

  2. XM_018050129.1 → XP_017905618.1  ras GTPase-activating protein-binding protein 1 isoform X1

    UniProtKB/TrEMBL
    A0AAJ7K4Y8

  3. XM_018050130.1 → XP_017905619.1  ras GTPase-activating protein-binding protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A452ESU0
    Related
    ENSCHIP00000015244.1, ENSCHIT00000023046.2
Nucleotide Protein
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