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SPHK1 sphingosine kinase 1 [ Capra hircus (goat) ]

Gene ID: 102168201, updated on 1-Aug-2024

Summary

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Gene symbol
SPHK1
Gene description
sphingosine kinase 1
See related
EnsemblRapid:ENSCHIG00000021681
Gene type
protein coding
RefSeq status
MODEL
Organism
Capra hircus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Capra
Orthologs
human mouse all
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Genomic context

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See SPHK1 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
7
Annotation release Status Assembly Chr Location
102 current ASM170441v1 (GCF_001704415.1) 19 NC_030826.1 (54574128..54578236, complement)
101 previous assembly CHIR_1.0 (GCF_000317765.1) 19 NC_022311.1 (54193950..54196811, complement)

Chromosome 19 - NC_030826.1Genomic Context describing neighboring genes Neighboring gene aralkylamine N-acetyltransferase Neighboring gene ubiquitin conjugating enzyme E2 O Neighboring gene uncharacterized LOC102185500 Neighboring gene uncharacterized LOC102185776

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables D-erythro-sphingosine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular response to growth factor stimulus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sphingosine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in intracellular membrane-bounded organelle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sphingosine kinase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Capra hircus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM170441v1 Primary Assembly

Genomic

  1. NC_030826.1 Reference ASM170441v1 Primary Assembly

    Range
    54574128..54578236 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018063748.1 → XP_017919237.1  sphingosine kinase 1 isoform X2

    UniProtKB/TrEMBL
    A0A452FK78, A0AAJ7KVQ0

  2. XM_018063747.1 → XP_017919236.1  sphingosine kinase 1 isoform X1

    UniProtKB/TrEMBL
    A0A452FK78, A0A8C2QYM0
    Related
    ENSCHIP00000024556.2, ENSCHIT00000032416.2

  3. XM_018063749.1 → XP_017919238.1  sphingosine kinase 1 isoform X3

    UniProtKB/TrEMBL
    A0A452FK78, A0AAJ7KVP8
    Related
    ENSCHIP00000024563.2, ENSCHIT00000032423.2

  4. XM_018063750.1 → XP_017919239.1  sphingosine kinase 1 isoform X3

    UniProtKB/TrEMBL
    A0A452FK78, A0AAJ7KVP8

  5. XM_018063751.1 → XP_017919240.1  sphingosine kinase 1 isoform X3

    UniProtKB/TrEMBL
    A0A452FK78, A0AAJ7KVP8
Nucleotide Protein
Heading Accession and Version

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