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LOC102165305 uncharacterized LOC102165305 [ Sus scrofa (pig) ]

Gene ID: 102165305, updated on 24-Jun-2020

Summary

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Gene symbol
LOC102165305
Gene description
uncharacterized LOC102165305
Gene type
ncRNA
RefSeq status
MODEL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression
Biased expression in ovary (RPKM 1.8), mixtures (RPKM 0.5) and 3 other tissues See more
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Genomic context

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See LOC102165305 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
3
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 5 NC_010447.5 (67716137..67721254)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) 5 NC_010447.4 (69917403..69922512)

Chromosome 5 - NC_010447.5Genomic Context describing neighboring genes Neighboring gene solute carrier family 6 member 12 Neighboring gene solute carrier family 6 member 13 Neighboring gene lysine demethylase 5A Neighboring gene coiled-coil domain containing 77 Neighboring gene beta-1,4-N-acetyl-galactosaminyltransferase 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

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GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010447.5 Reference Sscrofa11.1 Primary Assembly

    Range
    67716137..67721254
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_303532.3 RNA Sequence

  2. XR_002344142.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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