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INAVA innate immunity activator [ Sus scrofa (pig) ]

Gene ID: 102164093, updated on 17-Aug-2024

Summary

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Official Symbol
INAVAprovided by VGNC
Official Full Name
innate immunity activatorprovided by VGNC
Primary source
VGNC:VGNC:96093
See related
Ensembl:ENSSSCG00000032735
Gene type
protein coding
RefSeq status
MODEL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Also known as
C10H1orf106
Expression
Biased expression in kidney (RPKM 1.1), lung (RPKM 0.7) and 4 other tissues See more
Orthologs
human mouse all
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Genomic context

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See INAVA in Genome Data Viewer
Location:
chromosome: 10
Exon count:
10
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 10 NC_010452.4 (23392202..23414318)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) Unplaced Scaffold NW_003538006.2 (36426..41420, complement)

Chromosome 10 - NC_010452.4Genomic Context describing neighboring genes Neighboring gene calmodulin regulated spectrin associated protein family member 2 Neighboring gene uncharacterized LOC110255657 Neighboring gene G protein-coupled receptor 25 Neighboring gene uncharacterized LOC110255593 Neighboring gene kinesin family member 21B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Transcriptome data used for gene annotation Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in adherens junction maintenance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of protein ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: uncharacterized protein C1orf106 homolog
Names
chromosome 10 C1orf106 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010452.4 Reference Sscrofa11.1 Primary Assembly

    Range
    23392202..23414318
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021064503.1 → XP_020920162.1  LOW QUALITY PROTEIN: uncharacterized protein C1orf106 homolog

    UniProtKB/TrEMBL
    A0A8D1T9V3
    Related
    ENSSSCP00000035242.2, ENSSSCT00000038044.3
    Conserved Domains (1) summary
    pfam11819
    Location:87 → 215
    DUF3338; Domain of unknown function (DUF3338)
Nucleotide Protein
Heading Accession and Version

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Research Materials