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EPHX4 epoxide hydrolase 4 [ Sus scrofa (pig) ]

Gene ID: 102161927, updated on 17-Aug-2024

Summary

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Official Symbol
EPHX4provided by VGNC
Official Full Name
epoxide hydrolase 4provided by VGNC
Primary source
VGNC:VGNC:97981
See related
Ensembl:ENSSSCG00000032057
Gene type
protein coding
RefSeq status
MODEL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression
Low expression observed in reference dataset See more
Orthologs
human mouse all
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Genomic context

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See EPHX4 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
8
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 4 NC_010446.5 (124961246..124992789, complement)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) Unplaced Scaffold NW_003540507.1 (9468..13497)

Chromosome 4 - NC_010446.5Genomic Context describing neighboring genes Neighboring gene KIAA1107 ortholog Neighboring gene lysophosphatidylcholine acyltransferase 2b Neighboring gene bromodomain testis associated Neighboring gene prefoldin subunit 4 pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Transcriptome data used for gene annotation Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
epoxide hydrolase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010446.5 Reference Sscrofa11.1 Primary Assembly

    Range
    124961246..124992789 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021090246.1 → XP_020945905.1  epoxide hydrolase 4 isoform X1

    UniProtKB/TrEMBL
    A0A287AQU9, A0A4X1U5T2, A0A8D1LIE9, A0A8D1ZMX3
    Related
    ENSSSCP00000046332.1, ENSSSCT00000044329.3
    Conserved Domains (1) summary
    COG0596
    Location:76 → 350
    MhpC; Pimeloyl-ACP methyl ester carboxylesterase [Coenzyme transport and metabolism, General function prediction only]

  2. XM_021090247.1 → XP_020945906.1  epoxide hydrolase 4 isoform X2

    UniProtKB/TrEMBL
    A0A8D0JV69
    Conserved Domains (1) summary
    COG0596
    Location:23 → 299
    MhpC; Pimeloyl-ACP methyl ester carboxylesterase [Coenzyme transport and metabolism, General function prediction only]
Nucleotide Protein
Heading Accession and Version

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