U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

MAD1L1 mitotic arrest deficient 1 like 1 [ Sus scrofa (pig) ]

Gene ID: 102157652, updated on 17-Aug-2024

Summary

Go to the top of the page Help
Official Symbol
MAD1L1provided by VGNC
Official Full Name
mitotic arrest deficient 1 like 1provided by VGNC
Primary source
VGNC:VGNC:89938
See related
Ensembl:ENSSSCG00000038766
Gene type
protein coding
RefSeq status
MODEL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression
Ubiquitous expression in ovary (RPKM 6.5), lung (RPKM 2.9) and 8 other tissues See more
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See MAD1L1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
18
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 3 NC_010445.4 (1236066..1559346, complement)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) 3 NC_010445.3 (1859406..1883565, complement)

Chromosome 3 - NC_010445.4Genomic Context describing neighboring genes Neighboring gene collagen alpha-1(III) chain-like Neighboring gene extracellular leucine rich repeat and fibronectin type III domain containing 1 Neighboring gene killer cell lectin-like receptor subfamily G member 2 Neighboring gene uncharacterized LOC110259832 Neighboring gene translation initiation factor IF-2-like Neighboring gene nudix hydrolase 1 Neighboring gene mitochondrial rRNA methyltransferase 2

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: Transcriptome data used for gene annotation Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. PEDE (Pig EST Data Explorer) has been expanded into Pig Expression Data Explorer, including 10 147 porcine full-length cDNA sequences. Uenishi H, et al. Nucleic Acids Res, 2007 Jan. PMID 17145712, Free PMC Article
  2. PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries. Uenishi H, et al. Nucleic Acids Res, 2004 Jan 1. PMID 14681463, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in attachment of mitotic spindle microtubules to kinetochore IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitotic spindle assembly checkpoint signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in kinetochore IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitotic spindle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nuclear envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
mitotic spindle assembly checkpoint protein MAD1
Names
MAD1 mitotic arrest deficient like 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010445.4 Reference Sscrofa11.1 Primary Assembly

    Range
    1236066..1559346 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021085975.1 → XP_020941634.1  mitotic spindle assembly checkpoint protein MAD1

    UniProtKB/TrEMBL
    A0A480SZZ0, A0A4X1TLE7, A0A8D1T919
    Related
    ENSSSCP00000037716.3, ENSSSCT00000062437.3
    Conserved Domains (1) summary
    pfam05557
    Location:54 → 715
    MAD; Mitotic checkpoint protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.