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IMP4 IMP U3 small nucleolar ribonucleoprotein 4 [ Macaca fascicularis (crab-eating macaque) ]

Gene ID: 102146300, updated on 7-Jun-2024

Summary

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Gene symbol
IMP4
Gene description
IMP U3 small nucleolar ribonucleoprotein 4
See related
Ensembl:ENSMFAG00000045624
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca fascicularis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See IMP4 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_05 current T2T-MFA8v1.0 (GCF_037993035.1) 12 NC_088386.1 (427080..432272, complement)
102 previous assembly MFA1912RKSv2 (GCF_012559485.2) 8 NC_052262.1 (63708..67413, complement)

Chromosome 12 - NC_088386.1Genomic Context describing neighboring genes Neighboring gene protein tyrosine phosphatase non-receptor type 18 Neighboring gene uncharacterized LOC135966486 Neighboring gene coiled-coil domain containing 115 Neighboring gene transfer RNA glutamic acid (anticodon UUC)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables rRNA primary transcript binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables snoRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in rRNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Mpp10 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of small-subunit processome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
U3 small nucleolar ribonucleoprotein protein IMP4
Names
IMP4 homolog, U3 small nucleolar ribonucleoprotein
IMP4, U3 small nucleolar ribonucleoprotein, homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_037993035.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference T2T-MFA8v1.0

Genomic

  1. NC_088386.1 Reference T2T-MFA8v1.0

    Range
    427080..432272 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005572827.3 → XP_005572884.1  U3 small nucleolar ribonucleoprotein protein IMP4

    See identical proteins and their annotated locations for XP_005572884.1

    UniProtKB/TrEMBL
    A0A7N9CN51, G7PHA1
    Related
    ENSMFAP00000028542.1
    Conserved Domains (1) summary
    smart00879
    Location:86 → 253
    Brix; The Brix domain is found in a number of eukaryotic proteins
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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