U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

PTPN18 protein tyrosine phosphatase non-receptor type 18 [ Macaca fascicularis (crab-eating macaque) ]

Gene ID: 102145285, updated on 7-Jun-2024

Summary

Go to the top of the page Help
Gene symbol
PTPN18
Gene description
protein tyrosine phosphatase non-receptor type 18
See related
Ensembl:ENSMFAG00000003200
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca fascicularis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See PTPN18 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2024_05 current T2T-MFA8v1.0 (GCF_037993035.1) 12 NC_088386.1 (394796..419727, complement)
102 previous assembly MFA1912RKSv2 (GCF_012559485.2) 8 NC_052262.1 (36050..54864, complement)

Chromosome 12 - NC_088386.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC135966485 Neighboring gene uncharacterized LOC101926247 Neighboring gene uncharacterized LOC135966487 Neighboring gene uncharacterized LOC135966486 Neighboring gene IMP U3 small nucleolar ribonucleoprotein 4

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables non-membrane spanning protein tyrosine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in peptidyl-tyrosine dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
tyrosine-protein phosphatase non-receptor type 18
Names
protein tyrosine phosphatase, non-receptor type 18 (brain-derived)

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_037993035.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference T2T-MFA8v1.0

Genomic

  1. NC_088386.1 Reference T2T-MFA8v1.0

    Range
    394796..419727 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045397767.2 → XP_045253702.2  tyrosine-protein phosphatase non-receptor type 18 isoform X3

  2. XM_065525310.1 → XP_065381382.1  tyrosine-protein phosphatase non-receptor type 18 isoform X2

  3. XM_005572824.4 → XP_005572881.3  tyrosine-protein phosphatase non-receptor type 18 isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.