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DERA deoxyribose-phosphate aldolase [ Macaca fascicularis (crab-eating macaque) ]

Gene ID: 102144892, updated on 10-Oct-2024

Summary

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Gene symbol
DERA
Gene description
deoxyribose-phosphate aldolase
See related
Ensembl:ENSMFAG00000000908
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca fascicularis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See DERA in Genome Data Viewer
Location:
chromosome: 11
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_05 current T2T-MFA8v1.0 (GCF_037993035.1) 11 NC_088385.1 (18727343..18856343)
102 previous assembly MFA1912RKSv2 (GCF_012559485.2) 11 NC_052265.1 (16053487..16204199)

Chromosome 11 - NC_088385.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC135966176 Neighboring gene uncharacterized LOC135966177 Neighboring gene serine/threonine kinase receptor associated protein Neighboring gene uncharacterized LOC135966178 Neighboring gene uncharacterized LOC135966179

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables deoxyribose-phosphate aldolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in deoxyribonucleotide catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
deoxyribose-phosphate aldolase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_037993035.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference T2T-MFA8v1.0

Genomic

  1. NC_088385.1 Reference T2T-MFA8v1.0

    Range
    18727343..18856343
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005570251.4 → XP_005570308.1  deoxyribose-phosphate aldolase isoform X1

    See identical proteins and their annotated locations for XP_005570308.1

    UniProtKB/TrEMBL
    A0A2K5U9U9, G7PJY8
    Related
    ENSMFAP00000009127.1
    Conserved Domains (1) summary
    cd00959
    Location:50 → 277
    DeoC; 2-deoxyribose-5-phosphate aldolase (DERA) of the DeoC family

  2. XM_065523804.1 → XP_065379876.1  deoxyribose-phosphate aldolase isoform X2

    UniProtKB/TrEMBL
    A0A2K5U9S6

RNA

  1. XR_010579300.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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