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KIRREL1 kirre like nephrin family adhesion molecule 1 [ Macaca fascicularis (crab-eating macaque) ]

Gene ID: 102143965, updated on 10-Oct-2024

Summary

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Gene symbol
KIRREL1
Gene description
kirre like nephrin family adhesion molecule 1
See related
Ensembl:ENSMFAG00000034013
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca fascicularis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Also known as
KIRREL
Orthologs
human mouse all
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Genomic context

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See KIRREL1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2024_05 current T2T-MFA8v1.0 (GCF_037993035.1) 1 NC_088375.1 (103000673..103110074, complement)
102 previous assembly MFA1912RKSv2 (GCF_012559485.2) 1 NC_052255.1 (91599760..91708902, complement)

Chromosome 1 - NC_088375.1Genomic Context describing neighboring genes Neighboring gene RNA polymerase II elongation factor ELL2-like Neighboring gene small integral membrane protein 42 Neighboring gene uncharacterized LOC102144577 Neighboring gene uncharacterized LOC135970647 Neighboring gene uncharacterized LOC135970648 Neighboring gene uncharacterized LOC107130360 Neighboring gene Fc receptor-like protein 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
kin of IRRE-like protein 1
Names
kin of IRRE like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_037993035.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference T2T-MFA8v1.0

Genomic

  1. NC_088375.1 Reference T2T-MFA8v1.0

    Range
    103000673..103110074 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005541346.4 → XP_005541403.1  kin of IRRE-like protein 1 isoform X2

    See identical proteins and their annotated locations for XP_005541403.1

    UniProtKB/TrEMBL
    G7NW85
    Related
    ENSMFAP00000010007.1
    Conserved Domains (4) summary
    cd05759
    Location:138 → 219
    Ig2_KIRREL3-like; Second immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 (also known as Neph2)
    cd05898
    Location:391 → 488
    Ig5_KIRREL3; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 protein (also known as Neph2)
    pfam07679
    Location:22 → 116
    I-set; Immunoglobulin I-set domain
    pfam13927
    Location:308 → 373
    Ig_3; Immunoglobulin domain

  2. XM_065544162.1 → XP_065400234.1  kin of IRRE-like protein 1 isoform X3

  3. XM_005541345.4 → XP_005541402.1  kin of IRRE-like protein 1 isoform X1

    See identical proteins and their annotated locations for XP_005541402.1

    UniProtKB/TrEMBL
    G7NW85
    Related
    ENSMFAP00000009991.1
    Conserved Domains (4) summary
    cd05759
    Location:138 → 219
    Ig2_KIRREL3-like; Second immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 (also known as Neph2)
    cd05898
    Location:407 → 504
    Ig5_KIRREL3; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 protein (also known as Neph2)
    pfam07679
    Location:22 → 116
    I-set; Immunoglobulin I-set domain
    pfam13927
    Location:308 → 389
    Ig_3; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version

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