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ZGPAT zinc finger CCCH-type and G-patch domain containing [ Macaca fascicularis (crab-eating macaque) ]

Gene ID: 102138108, updated on 12-Jun-2024

Summary

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Gene symbol
ZGPAT
Gene description
zinc finger CCCH-type and G-patch domain containing
See related
Ensembl:ENSMFAG00000001467
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca fascicularis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See ZGPAT in Genome Data Viewer
Location:
chromosome: 10
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_05 current T2T-MFA8v1.0 (GCF_037993035.1) 10 NC_088384.1 (119825174..119852371)
102 previous assembly MFA1912RKSv2 (GCF_012559485.2) 10 NC_052264.1 (59910862..59938893)

Chromosome 10 - NC_088384.1Genomic Context describing neighboring genes Neighboring gene TNF receptor superfamily member 6b Neighboring gene ADP ribosylation factor related protein 1 Neighboring gene uncharacterized LOC135965687 Neighboring gene SLC2A4 regulator Neighboring gene Lck interacting transmembrane adaptor 1 Neighboring gene zinc finger and BTB domain containing 46

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription repressor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger CCCH-type with G patch domain-containing protein
Names
zinc finger, CCCH-type with G patch domain

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_037993035.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference T2T-MFA8v1.0

Genomic

  1. NC_088384.1 Reference T2T-MFA8v1.0

    Range
    119825174..119852371
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015430122.3 → XP_015285608.3  zinc finger CCCH-type with G patch domain-containing protein isoform X1

  2. XM_065523429.1 → XP_065379501.1  zinc finger CCCH-type with G patch domain-containing protein isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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