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TFIP11 tuftelin interacting protein 11 [ Macaca fascicularis (crab-eating macaque) ]

Gene ID: 102137831, updated on 10-Oct-2024

Summary

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Gene symbol
TFIP11
Gene description
tuftelin interacting protein 11
See related
Ensembl:ENSMFAG00000043406
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca fascicularis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Also known as
STIP; STIP-1
Orthologs
human mouse all
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Genomic context

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See TFIP11 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2024_05 current T2T-MFA8v1.0 (GCF_037993035.1) 10 NC_088384.1 (25172825..25192665)
102 previous assembly MFA1912RKSv2 (GCF_012559485.2) 10 NC_052264.1 (84886465..84906293)

Chromosome 10 - NC_088384.1Genomic Context describing neighboring genes Neighboring gene crystallin beta A4 Neighboring gene crystallin beta B1 Neighboring gene tyrosylprotein sulfotransferase 2 Neighboring gene SRR1 domain containing Neighboring gene HPS4 biogenesis of lysosomal organelles complex 3 subunit 2 Neighboring gene aspartate beta-hydroxylase domain containing 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Characterization of STIP, a multi-domain nuclear protein, highly conserved in metazoans, and essential for embryogenesis in Caenorhabditis elegans. Ji Q, et al. Exp Cell Res, 2007 Apr 15. PMID 17289020
  2. Substitution rate and structural divergence of 5'UTR evolution: comparative analysis between human and cynomolgus monkey cDNAs. Osada N, et al. Mol Biol Evol, 2005 Oct. PMID 15944441
  3. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in spliceosomal complex disassembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of U2-type post-mRNA release spliceosomal complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tuftelin-interacting protein 11
Names
Septin and tuftelin-interacting protein 1
Tuftelin-interacting protein 11

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_037993035.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference T2T-MFA8v1.0

Genomic

  1. NC_088384.1 Reference T2T-MFA8v1.0

    Range
    25172825..25192665
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_065522330.1 → XP_065378402.1  tuftelin-interacting protein 11

    UniProtKB/TrEMBL
    A0A2K5VFC3, A0A7N9IER5

  2. XM_015457363.3 → XP_015312849.1  tuftelin-interacting protein 11

    UniProtKB/TrEMBL
    A0A2K5VFC3, A0A7N9IER5, G7PHF9
    Related
    ENSMFAP00000023492.1
    Conserved Domains (3) summary
    pfam01585
    Location:149 → 193
    G-patch; G-patch domain
    pfam07842
    Location:397 → 666
    GCFC; GC-rich sequence DNA-binding factor-like protein
    pfam12457
    Location:23 → 102
    TIP_N; Tuftelin interacting protein N terminal

  3. XM_065522329.1 → XP_065378401.1  tuftelin-interacting protein 11

    UniProtKB/TrEMBL
    A0A2K5VFC3, A0A7N9IER5

  4. XM_015457364.3 → XP_015312850.1  tuftelin-interacting protein 11

    UniProtKB/TrEMBL
    A0A2K5VFC3, A0A7N9IER5, G7PHF9
    Conserved Domains (3) summary
    pfam01585
    Location:149 → 193
    G-patch; G-patch domain
    pfam07842
    Location:397 → 666
    GCFC; GC-rich sequence DNA-binding factor-like protein
    pfam12457
    Location:23 → 102
    TIP_N; Tuftelin interacting protein N terminal

  5. XM_005567731.4 → XP_005567788.1  tuftelin-interacting protein 11

    See identical proteins and their annotated locations for XP_005567788.1

    UniProtKB/TrEMBL
    A0A2K5VFC3, A0A7N9IER5, G7PHF9
    Conserved Domains (3) summary
    pfam01585
    Location:149 → 193
    G-patch; G-patch domain
    pfam07842
    Location:397 → 666
    GCFC; GC-rich sequence DNA-binding factor-like protein
    pfam12457
    Location:23 → 102
    TIP_N; Tuftelin interacting protein N terminal

  6. XM_005567730.4 → XP_005567787.1  tuftelin-interacting protein 11

    See identical proteins and their annotated locations for XP_005567787.1

    UniProtKB/TrEMBL
    A0A2K5VFC3, A0A7N9IER5, G7PHF9
    Conserved Domains (3) summary
    pfam01585
    Location:149 → 193
    G-patch; G-patch domain
    pfam07842
    Location:397 → 666
    GCFC; GC-rich sequence DNA-binding factor-like protein
    pfam12457
    Location:23 → 102
    TIP_N; Tuftelin interacting protein N terminal
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A1XD95.1 GenPept UniProtKB/Swiss-Prot:A1XD95

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