U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

NDST1 N-deacetylase and N-sulfotransferase 1 [ Macaca fascicularis (crab-eating macaque) ]

Gene ID: 102134215, updated on 10-Oct-2024

Summary

Go to the top of the page Help
Gene symbol
NDST1
Gene description
N-deacetylase and N-sulfotransferase 1
See related
Ensembl:ENSMFAG00000031848
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca fascicularis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See NDST1 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
20
Annotation release Status Assembly Chr Location
RS_2024_05 current T2T-MFA8v1.0 (GCF_037993035.1) 6 NC_088380.1 (157364157..157436962)
102 previous assembly MFA1912RKSv2 (GCF_012559485.2) 6 NC_052260.1 (145706175..145779312)

Chromosome 6 - NC_088380.1Genomic Context describing neighboring genes Neighboring gene ribosomal protein S14 Neighboring gene uncharacterized LOC135971453 Neighboring gene small nucleolar RNA U13 Neighboring gene synaptopodin Neighboring gene myozenin 3 Neighboring gene RNA binding motif protein 22

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine N-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables deacetylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1
Names
N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_037993035.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference T2T-MFA8v1.0

Genomic

  1. NC_088380.1 Reference T2T-MFA8v1.0

    Range
    157364157..157436962
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045394401.2 → XP_045250336.2  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1 isoform X1

  2. XM_045394406.2 → XP_045250341.2  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1 isoform X2

  3. XM_015452146.3 → XP_015307632.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1 isoform X3

    UniProtKB/TrEMBL
    A0A2K5UYC2
    Conserved Domains (2) summary
    pfam00685
    Location:441 → 691
    Sulfotransfer_1; Sulfotransferase domain
    pfam12062
    Location:8 → 351
    HSNSD; heparan sulfate-N-deacetylase

  4. XM_015452143.3 → XP_015307629.2  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1 isoform X1

  5. XM_045394402.2 → XP_045250337.2  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1 isoform X1

  6. XM_015452147.3 → XP_015307633.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1 isoform X3

    UniProtKB/TrEMBL
    A0A2K5UYC2
    Conserved Domains (2) summary
    pfam00685
    Location:441 → 691
    Sulfotransfer_1; Sulfotransferase domain
    pfam12062
    Location:8 → 351
    HSNSD; heparan sulfate-N-deacetylase

  7. XM_015452144.3 → XP_015307630.2  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1 isoform X1

  8. XM_045394403.2 → XP_045250338.2  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1 isoform X1

  9. XM_045394407.2 → XP_045250342.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1 isoform X3

    Conserved Domains (2) summary
    pfam00685
    Location:441 → 691
    Sulfotransfer_1; Sulfotransferase domain
    pfam12062
    Location:8 → 351
    HSNSD; heparan sulfate-N-deacetylase

  10. XM_045394404.2 → XP_045250339.2  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1 isoform X1

  11. XM_045394405.2 → XP_045250340.2  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1 isoform X1

  12. XM_045394408.2 → XP_045250343.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1 isoform X3

    Conserved Domains (2) summary
    pfam00685
    Location:441 → 691
    Sulfotransfer_1; Sulfotransferase domain
    pfam12062
    Location:8 → 351
    HSNSD; heparan sulfate-N-deacetylase

  13. XM_065546972.1 → XP_065403044.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1 isoform X1

  14. XM_065546976.1 → XP_065403048.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1 isoform X3

  15. XM_065546975.1 → XP_065403047.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1 isoform X1

  16. XM_065546974.1 → XP_065403046.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1 isoform X1

  17. XM_065546977.1 → XP_065403049.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1 isoform X3

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.