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LOC102133701 T-cell surface glycoprotein CD3 delta chain-like [ Macaca fascicularis (crab-eating macaque) ]

Gene ID: 102133701, updated on 7-Jun-2024

Summary

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Gene symbol
LOC102133701
Gene description
T-cell surface glycoprotein CD3 delta chain-like
See related
Ensembl:ENSMFAG00000045644
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca fascicularis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Also known as
CD3D
Orthologs
human mouse all
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Genomic context

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See LOC102133701 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_05 current T2T-MFA8v1.0 (GCF_037993035.1) 14 NC_088388.1 (117194229..117197824, complement)
102 previous assembly MFA1912RKSv2 (GCF_012559485.2) 14 NC_052268.1 (16177153..16180749)

Chromosome 14 - NC_088388.1Genomic Context describing neighboring genes Neighboring gene junction adhesion molecule like Neighboring gene myelin protein zero like 3 Neighboring gene T-cell surface glycoprotein CD3 epsilon chain-like Neighboring gene myelin protein zero like 2 Neighboring gene T-cell surface glycoprotein CD3 gamma chain-like Neighboring gene ubiquitination factor E4A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. CD3 polymorphism in cynomolgus monkeys (Macaca fascicularis). Uda A, et al. J Med Primatol, 2001 Jun. PMID 11515669
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transmembrane signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell surface receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive thymic T cell selection IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of alpha-beta T cell receptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
T-cell surface glycoprotein CD3 delta chain
Names
CD3 delta
CD3d molecule, delta (CD3-TCR complex)
T-cell receptor T3 delta chain

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_037993035.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference T2T-MFA8v1.0

Genomic

  1. NC_088388.1 Reference T2T-MFA8v1.0

    Range
    117194229..117197824 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005579799.4 → XP_005579856.2  T-cell surface glycoprotein CD3 delta chain isoform X3

  2. XM_045370957.2 → XP_045226892.2  T-cell surface glycoprotein CD3 delta chain isoform X2

  3. XM_015435355.3 → XP_015290841.2  T-cell surface glycoprotein CD3 delta chain isoform X1

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001287688.1: Suppressed sequence

    Description
    NM_001287688.1: This RefSeq record was removed as a result of standard genome annotation processing. Contact info@ncbi.nlm.nih.gov for further information.
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q95LI8.1 GenPept UniProtKB/Swiss-Prot:Q95LI8

Gene LinkOut

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