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ECHDC1 ethylmalonyl-CoA decarboxylase 1 [ Macaca fascicularis (crab-eating macaque) ]

Gene ID: 102132641, updated on 10-Oct-2024

Summary

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Gene symbol
ECHDC1
Gene description
ethylmalonyl-CoA decarboxylase 1
See related
Ensembl:ENSMFAG00000029749
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca fascicularis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See ECHDC1 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_05 current T2T-MFA8v1.0 (GCF_037993035.1) 4 NC_088378.1 (31236162..31290511, complement)
102 previous assembly MFA1912RKSv2 (GCF_012559485.2) 4 NC_052258.1 (137199228..137253556)

Chromosome 4 - NC_088378.1Genomic Context describing neighboring genes Neighboring gene R-spondin 3 Neighboring gene uncharacterized LOC102131631 Neighboring gene ring finger protein 146 Neighboring gene uncharacterized LOC135970535 Neighboring gene large ribosomal subunit protein uL18-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid beta-oxidation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ethylmalonyl-CoA decarboxylase
Names
enoyl CoA hydratase domain containing 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_037993035.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference T2T-MFA8v1.0

Genomic

  1. NC_088378.1 Reference T2T-MFA8v1.0

    Range
    31236162..31290511 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_065543360.1 → XP_065399432.1  ethylmalonyl-CoA decarboxylase isoform X2

    UniProtKB/TrEMBL
    A0A2K5UN28

  2. XM_005551759.4 → XP_005551816.1  ethylmalonyl-CoA decarboxylase isoform X2

    See identical proteins and their annotated locations for XP_005551816.1

    UniProtKB/TrEMBL
    A0A2K5UN28, G7P375
    Conserved Domains (1) summary
    cd06558
    Location:49 → 245
    crotonase-like; Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. ...

  3. XM_065543361.1 → XP_065399433.1  ethylmalonyl-CoA decarboxylase isoform X2

    UniProtKB/TrEMBL
    A0A2K5UN28

  4. XM_005551756.4 → XP_005551813.1  ethylmalonyl-CoA decarboxylase isoform X1

    See identical proteins and their annotated locations for XP_005551813.1

    UniProtKB/TrEMBL
    A0A2K5UN41, G7P375
    Related
    ENSMFAP00000013827.1
    Conserved Domains (1) summary
    cd06558
    Location:55 → 251
    crotonase-like; Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. ...

  5. XM_065543364.1 → XP_065399436.1  ethylmalonyl-CoA decarboxylase isoform X4

  6. XM_065543362.1 → XP_065399434.1  ethylmalonyl-CoA decarboxylase isoform X3

  7. XM_065543363.1 → XP_065399435.1  ethylmalonyl-CoA decarboxylase isoform X3

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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