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ADAD1 adenosine deaminase domain containing 1 [ Macaca fascicularis (crab-eating macaque) ]

Gene ID: 102126276, updated on 7-Jun-2024

Summary

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Gene symbol
ADAD1
Gene description
adenosine deaminase domain containing 1
See related
Ensembl:ENSMFAG00000003813
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca fascicularis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See ADAD1 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_05 current T2T-MFA8v1.0 (GCF_037993035.1) 5 NC_088379.1 (127465910..127518023)
102 previous assembly MFA1912RKSv2 (GCF_012559485.2) 5 NC_052259.1 (118778414..118829396)

Chromosome 5 - NC_088379.1Genomic Context describing neighboring genes Neighboring gene signal peptidase complex subunit 2-like Neighboring gene bridge-like lipid transfer protein family member 1 Neighboring gene interleukin 2 Neighboring gene interleukin 21

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Cynomolgus monkey testicular cDNAs for discovery of novel human genes in the human genome sequence. Osada N, et al. BMC Genomics, 2002 Dec 23. PMID 12498619, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables double-stranded RNA adenosine deaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables double-stranded RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tRNA-specific adenosine deaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in RNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in adenosine to inosine editing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
adenosine deaminase domain-containing protein 1
Names
adenosine deaminase domain containing 1 (testis-specific)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_037993035.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference T2T-MFA8v1.0

Genomic

  1. NC_088379.1 Reference T2T-MFA8v1.0

    Range
    127465910..127518023
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005555851.4 → XP_005555908.1  adenosine deaminase domain-containing protein 1

    See identical proteins and their annotated locations for XP_005555908.1

    UniProtKB/TrEMBL
    A0A2K5WC88, G7P678
    Conserved Domains (3) summary
    smart00358
    Location:97 → 162
    DSRM; Double-stranded RNA binding motif
    pfam02137
    Location:249 → 568
    A_deamin; Adenosine-deaminase (editase) domain
    cl02015
    Location:143 → 294
    YycI; YycH protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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