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MGAT5 alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase [ Macaca fascicularis (crab-eating macaque) ]

Gene ID: 102123398, updated on 11-Jun-2024

Summary

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Gene symbol
MGAT5
Gene description
alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase
See related
Ensembl:ENSMFAG00000002058
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca fascicularis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See MGAT5 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2024_05 current T2T-MFA8v1.0 (GCF_037993035.1) 12 NC_088386.1 (19950650..20283406)
102 previous assembly MFA1912RKSv2 (GCF_012559485.2) 12 NC_052266.1 (18808905..19144263)

Chromosome 12 - NC_088386.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102121628 Neighboring gene uncharacterized LOC102122293 Neighboring gene epididymal secretory protein E3-beta-like Neighboring gene transmembrane protein 163 Neighboring gene uncharacterized LOC135966520 Neighboring gene aminocarboxymuconate semialdehyde decarboxylase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A
Names
mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_037993035.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference T2T-MFA8v1.0

Genomic

  1. NC_088386.1 Reference T2T-MFA8v1.0

    Range
    19950650..20283406
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005572984.4 → XP_005573041.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A

    See identical proteins and their annotated locations for XP_005573041.1

    UniProtKB/TrEMBL
    A0A2K5TXD8, A0A8J8XC29, G7PN39
    Conserved Domains (2) summary
    pfam15027
    Location:7 → 138
    DUF4525; Domain of unknown function (DUF4525)
    pfam15024
    Location:172 → 726
    Glyco_transf_18; Glycosyltransferase family 18

  2. XM_005572985.4 → XP_005573042.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A

    See identical proteins and their annotated locations for XP_005573042.1

    UniProtKB/TrEMBL
    A0A2K5TXD8, A0A8J8XC29, G7PN39
    Related
    ENSMFAP00000004738.1
    Conserved Domains (2) summary
    pfam15027
    Location:7 → 138
    DUF4525; Domain of unknown function (DUF4525)
    pfam15024
    Location:172 → 726
    Glyco_transf_18; Glycosyltransferase family 18
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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