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SYP synaptophysin [ Macaca fascicularis (crab-eating macaque) ]

Gene ID: 102119473, updated on 10-Oct-2024

Summary

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Gene symbol
SYP
Gene description
synaptophysin
See related
Ensembl:ENSMFAG00000037682
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca fascicularis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See SYP in Genome Data Viewer
Location:
chromosome: X
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_05 current T2T-MFA8v1.0 (GCF_037993035.1) X NC_088395.1 (49345107..49357229, complement)
102 previous assembly MFA1912RKSv2 (GCF_012559485.2) X NC_052275.1 (48915079..48927223, complement)

Chromosome X - NC_088395.1Genomic Context describing neighboring genes Neighboring gene MAGI family member, X-linked Neighboring gene prickle planar cell polarity protein 3 Neighboring gene proteolipid protein 2 Neighboring gene calcium voltage-gated channel subunit alpha1 F Neighboring gene heat shock protein beta-1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Rate of evolution in brain-expressed genes in humans and other primates. Wang HY, et al. PLoS Biol, 2007 Feb. PMID 17194215, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in regulation of neuronal synaptic plasticity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in presynaptic active zone IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synaptic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synaptic vesicle membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
synaptophysin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_037993035.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference T2T-MFA8v1.0

Genomic

  1. NC_088395.1 Reference T2T-MFA8v1.0

    Range
    49345107..49357229 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005593544.4 → XP_005593601.1  synaptophysin isoform X2

    See identical proteins and their annotated locations for XP_005593601.1

    UniProtKB/TrEMBL
    A0A7N9IAK7
    Related
    ENSMFAP00000036836.1
    Conserved Domains (1) summary
    pfam01284
    Location:22 → 221
    MARVEL; Membrane-associating domain

  2. XM_045383641.2 → XP_045239576.1  synaptophysin isoform X1

    Conserved Domains (1) summary
    pfam01284
    Location:132 → 255
    MARVEL; Membrane-associating domain
Nucleotide Protein
Heading Accession and Version

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