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B3GNT5 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 [ Macaca fascicularis (crab-eating macaque) ]

Gene ID: 102119427, updated on 1-Aug-2024

Summary

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Gene symbol
B3GNT5
Gene description
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5
See related
Ensembl:ENSMFAG00000011168
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca fascicularis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See B3GNT5 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_05 current T2T-MFA8v1.0 (GCF_037993035.1) 2 NC_088376.1 (95150226..95171434)
102 previous assembly MFA1912RKSv2 (GCF_012559485.2) 2 NC_052256.1 (107018925..107039620, complement)

Chromosome 2 - NC_088376.1Genomic Context describing neighboring genes Neighboring gene methylcrotonyl-CoA carboxylase subunit 1 Neighboring gene non-histone chromosomal protein HMG-17 Neighboring gene lysosomal associated membrane protein 3 Neighboring gene MCF.2 cell line derived transforming sequence-like 2 Neighboring gene uncharacterized LOC102118918 Neighboring gene uncharacterized LOC135969683

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_037993035.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference T2T-MFA8v1.0

Genomic

  1. NC_088376.1 Reference T2T-MFA8v1.0

    Range
    95150226..95171434
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005546492.4 → XP_005546549.1  lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase

    See identical proteins and their annotated locations for XP_005546549.1

    UniProtKB/TrEMBL
    A0A2K5UET4
    Conserved Domains (1) summary
    cl21608
    Location:101 → 297
    Galactosyl_T; Galactosyltransferase

  2. XM_005546491.4 → XP_005546548.1  lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase

    See identical proteins and their annotated locations for XP_005546548.1

    UniProtKB/TrEMBL
    A0A2K5UET4
    Conserved Domains (1) summary
    cl21608
    Location:101 → 297
    Galactosyl_T; Galactosyltransferase

  3. XM_065540260.1 → XP_065396332.1  lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase

    UniProtKB/TrEMBL
    A0A2K5UET4

  4. XM_065540258.1 → XP_065396330.1  lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase

    UniProtKB/TrEMBL
    A0A2K5UET4

  5. XM_005546494.4 → XP_005546551.1  lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase

    See identical proteins and their annotated locations for XP_005546551.1

    UniProtKB/TrEMBL
    A0A2K5UET4
    Related
    ENSMFAP00000010873.1
    Conserved Domains (1) summary
    cl21608
    Location:101 → 297
    Galactosyl_T; Galactosyltransferase

  6. XM_065540259.1 → XP_065396331.1  lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase

    UniProtKB/TrEMBL
    A0A2K5UET4

  7. XM_065540261.1 → XP_065396333.1  lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase

    UniProtKB/TrEMBL
    A0A2K5UET4

  8. XM_065540262.1 → XP_065396334.1  lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase

    UniProtKB/TrEMBL
    A0A2K5UET4
Nucleotide Protein
Heading Accession and Version

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