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LOC102118453 putative transcription factor SPT20 homolog-like 2 [ Macaca fascicularis (crab-eating macaque) ]

Gene ID: 102118453, updated on 7-Jun-2024

Summary

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Gene symbol
LOC102118453
Gene description
putative transcription factor SPT20 homolog-like 2
See related
Ensembl:ENSMFAG00000023565
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca fascicularis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
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Genomic context

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See LOC102118453 in Genome Data Viewer
Location:
chromosome: X
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_05 current T2T-MFA8v1.0 (GCF_037993035.1) X NC_088395.1 (24313402..24316056)
102 previous assembly MFA1912RKSv2 (GCF_012559485.2) X NC_052275.1 (23920135..23922765)

Chromosome X - NC_088395.1Genomic Context describing neighboring genes Neighboring gene coiled-coil-helix-coiled-coil-helix domain-containing protein 2-like Neighboring gene SUPT20H like 2 Neighboring gene pyruvate dehydrogenase kinase 3 Neighboring gene phosphate cytidylyltransferase 1B, choline Neighboring gene uncharacterized LOC135969284

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transcription coregulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SAGA complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative transcription factor SPT20 homolog-like 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_037993035.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference T2T-MFA8v1.0

Genomic

  1. NC_088395.1 Reference T2T-MFA8v1.0

    Range
    24313402..24316056
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015443311.3 → XP_015298797.3  putative transcription factor SPT20 homolog-like 2 isoform X1

  2. XM_065538061.1 → XP_065394133.1  putative transcription factor SPT20 homolog-like 2 isoform X2

Nucleotide Protein
Heading Accession and Version

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