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RBBP6 RB binding protein 6, ubiquitin ligase [ Macaca fascicularis (crab-eating macaque) ]

Gene ID: 102118067, updated on 12-Jun-2024

Summary

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Gene symbol
RBBP6
Gene description
RB binding protein 6, ubiquitin ligase
See related
Ensembl:ENSMFAG00000038627
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca fascicularis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See RBBP6 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
19
Annotation release Status Assembly Chr Location
RS_2024_05 current T2T-MFA8v1.0 (GCF_037993035.1) 20 NC_088394.1 (23625295..23658011)
102 previous assembly MFA1912RKSv2 (GCF_012559485.2) 20 NC_052274.1 (22849931..22877260)

Chromosome 20 - NC_088394.1Genomic Context describing neighboring genes Neighboring gene U7 small nuclear RNA Neighboring gene large ribosomal subunit protein uL3-like Neighboring gene trinucleotide repeat containing adaptor 6A Neighboring gene putative uncharacterized protein FLJ45256 Neighboring gene uncharacterized LOC135968718

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Rate of evolution in brain-expressed genes in humans and other primates. Wang HY, et al. PLoS Biol, 2007 Feb. PMID 17194215, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase RBBP6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_037993035.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference T2T-MFA8v1.0

Genomic

  1. NC_088394.1 Reference T2T-MFA8v1.0

    Range
    23625295..23658011
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_065537025.1 → XP_065393097.1  E3 ubiquitin-protein ligase RBBP6 isoform X1

  2. XM_065537026.1 → XP_065393098.1  E3 ubiquitin-protein ligase RBBP6 isoform X2

  3. XM_065537027.1 → XP_065393099.1  E3 ubiquitin-protein ligase RBBP6 isoform X3

  4. XM_065537028.1 → XP_065393100.1  E3 ubiquitin-protein ligase RBBP6 isoform X4

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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