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SPHK2 sphingosine kinase 2 [ Macaca fascicularis (crab-eating macaque) ]

Gene ID: 102116114, updated on 12-Jun-2024

Summary

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Gene symbol
SPHK2
Gene description
sphingosine kinase 2
See related
Ensembl:ENSMFAG00000036114
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca fascicularis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See SPHK2 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_05 current T2T-MFA8v1.0 (GCF_037993035.1) 19 NC_088393.1 (56613767..56624388)
102 previous assembly MFA1912RKSv2 (GCF_012559485.2) 19 NC_052273.1 (45660112..45670936)

Chromosome 19 - NC_088393.1Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 83 member E Neighboring gene sperm acrosome associated 4 Neighboring gene ribosomal protein L18 Neighboring gene D-box binding PAR bZIP transcription factor Neighboring gene carbonic anhydrase 11 Neighboring gene netrin 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables D-erythro-sphingosine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sphinganine-1-phosphate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sphingosine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in intracellular membrane-bounded organelle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sphingosine kinase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_037993035.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference T2T-MFA8v1.0

Genomic

  1. NC_088393.1 Reference T2T-MFA8v1.0

    Range
    56613767..56624388
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005589777.4 → XP_005589834.3  sphingosine kinase 2 isoform X2

  2. XM_005589776.4 → XP_005589833.3  sphingosine kinase 2 isoform X2

  3. XM_065534720.1 → XP_065390792.1  sphingosine kinase 2 isoform X3

  4. XM_005589780.4 → XP_005589837.3  sphingosine kinase 2 isoform X3

  5. XM_005589779.3 → XP_005589836.3  sphingosine kinase 2 isoform X3

  6. XM_065534718.1 → XP_065390790.1  sphingosine kinase 2 isoform X1

  7. XM_005589781.4 → XP_005589838.3  sphingosine kinase 2 isoform X3

Nucleotide Protein
Heading Accession and Version

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