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SGCD sarcoglycan delta [ Pseudopodoces humilis (Tibetan ground-tit) ]

Gene ID: 102102943, updated on 3-Aug-2024

Summary

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Gene symbol
SGCD
Gene description
sarcoglycan delta
Gene type
protein coding
RefSeq status
MODEL
Organism
Pseudopodoces humilis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Paridae; Pseudopodoces
Orthologs
human mouse all
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Genomic context

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See SGCD in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
101 current PseHum1.0 (GCF_000331425.1) Unplaced Scaffold NW_005087571.1 (10680956..10998655)

NW_005087571.1Genomic Context describing neighboring genes Neighboring gene gem nuclear organelle associated protein 5 Neighboring gene mitochondrial ribosomal protein L22 Neighboring gene T-cell immunoglobulin and mucin domain-containing protein 4 Neighboring gene hepatitis A virus cellular receptor 1 homolog

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005087571.1 Unplaced Scaffold Reference PseHum1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cardiac muscle tissue development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of sarcoglycan complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
delta-sarcoglycan

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pseudopodoces humilis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PseHum1.0 Primary Assembly

Genomic

  1. NW_005087571.1 Reference PseHum1.0 Primary Assembly

    Range
    10680956..10998655
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014253192.1 → XP_014108667.1  delta-sarcoglycan isoform X1

    Conserved Domains (1) summary
    pfam04790
    Location:22 → 276
    Sarcoglycan_1; Sarcoglycan complex subunit protein

  2. XM_014253193.1 → XP_014108668.1  delta-sarcoglycan isoform X1

    Conserved Domains (1) summary
    pfam04790
    Location:22 → 276
    Sarcoglycan_1; Sarcoglycan complex subunit protein

  3. XM_005523613.2 → XP_005523670.1  delta-sarcoglycan isoform X1

    Conserved Domains (1) summary
    pfam04790
    Location:22 → 276
    Sarcoglycan_1; Sarcoglycan complex subunit protein

  4. XM_014253194.1 → XP_014108669.1  delta-sarcoglycan isoform X2

    Conserved Domains (1) summary
    pfam04790
    Location:20 → 233
    Sarcoglycan_1; Sarcoglycan complex subunit protein
Nucleotide Protein
Heading Accession and Version

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