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TOR1AIP2 torsin 1A interacting protein 2 [ Pseudopodoces humilis (Tibetan ground-tit) ]

Gene ID: 102102096, updated on 3-Aug-2024

Summary

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Gene symbol
TOR1AIP2
Gene description
torsin 1A interacting protein 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Pseudopodoces humilis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Paridae; Pseudopodoces
Orthologs
human mouse all
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Genomic context

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See TOR1AIP2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
101 current PseHum1.0 (GCF_000331425.1) Unplaced Scaffold NW_005087604.1 (3120972..3129386)

NW_005087604.1Genomic Context describing neighboring genes Neighboring gene centrosomal protein 350 Neighboring gene torsin-1A-interacting protein 1 Neighboring gene ADAMTS-like protein 2 Neighboring gene family with sequence similarity 163 member A

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005087604.1 Unplaced Scaffold Reference PseHum1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in membrane organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
torsin-1A-interacting protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pseudopodoces humilis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PseHum1.0 Primary Assembly

Genomic

  1. NW_005087604.1 Reference PseHum1.0 Primary Assembly

    Range
    3120972..3129386
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014257613.1 → XP_014113088.1  torsin-1A-interacting protein 2 isoform X1

    Conserved Domains (2) summary
    pfam05609
    Location:92 → 524
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)
    pfam15724
    Location:14 → 113
    TMEM119; TMEM119 family

  2. XM_005528698.2 → XP_005528755.1  torsin-1A-interacting protein 2 isoform X2

    Conserved Domains (2) summary
    pfam05609
    Location:92 → 502
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)
    pfam15724
    Location:14 → 113
    TMEM119; TMEM119 family
Nucleotide Protein
Heading Accession and Version

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