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PCYT1A phosphate cytidylyltransferase 1A, choline [ Columba livia (rock pigeon) ]

Gene ID: 102098863, updated on 3-Aug-2024

Summary

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Gene symbol
PCYT1A
Gene description
phosphate cytidylyltransferase 1A, choline
Gene type
protein coding
RefSeq status
MODEL
Organism
Columba livia
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Columbimorphae; Columbiformes; Columbidae; Columba
Orthologs
human mouse all
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Genomic context

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See PCYT1A in Genome Data Viewer
Location:
chromosome: 9
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_05 current bColLiv1.pat.W.v2 (GCF_036013475.1) 9 NC_088610.1 (5813436..5834245, complement)
102 previous assembly Cliv_1.0 (GCF_000337935.1) Unplaced Scaffold NW_004973886.1 (1958803..1976449)

Chromosome 9 - NC_088610.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110355242 Neighboring gene solute carrier family 51 member A Neighboring gene dynein light chain Tctex-type 2B Neighboring gene programmed cell death 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomic diversity and evolution of the head crest in the rock pigeon. Shapiro MD, et al. Science, 2013 Mar 1. PMID 23371554, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables choline-phosphate cytidylyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylcholine binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in CDP-choline pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
choline-phosphate cytidylyltransferase A
Names
Choline-phosphate cytidylyltransferase A
phosphate cytidylyltransferase 1, choline, alpha

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036013475.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bColLiv1.pat.W.v2

Genomic

  1. NC_088610.1 Reference bColLiv1.pat.W.v2

    Range
    5813436..5834245 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_065073548.1 → XP_064929620.1  choline-phosphate cytidylyltransferase A

    UniProtKB/TrEMBL
    A0A2I0LU29

  2. XM_065073549.1 → XP_064929621.1  choline-phosphate cytidylyltransferase A

    UniProtKB/TrEMBL
    A0A2I0LU29

  3. XM_065073550.1 → XP_064929622.1  choline-phosphate cytidylyltransferase A

    UniProtKB/TrEMBL
    A0A2I0LU29

  4. XM_065073551.1 → XP_064929623.1  choline-phosphate cytidylyltransferase A

    UniProtKB/TrEMBL
    A0A2I0LU29

  5. XM_005513224.4 → XP_005513281.1  choline-phosphate cytidylyltransferase A

    See identical proteins and their annotated locations for XP_005513281.1

    UniProtKB/TrEMBL
    A0A2I0LU29
    Conserved Domains (1) summary
    cl28626
    Location:72 → 309
    PLN02406; ethanolamine-phosphate cytidylyltransferase
Nucleotide Protein
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