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SGCG sarcoglycan gamma [ Columba livia (rock pigeon) ]

Gene ID: 102097508, updated on 3-Aug-2024

Summary

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Gene symbol
SGCG
Gene description
sarcoglycan gamma
Gene type
protein coding
RefSeq status
MODEL
Organism
Columba livia
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Columbimorphae; Columbiformes; Columbidae; Columba
Orthologs
human mouse all
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Genomic context

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See SGCG in Genome Data Viewer
Location:
chromosome: 1
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2024_05 current bColLiv1.pat.W.v2 (GCF_036013475.1) 1 NC_088602.1 (21425651..21559398)
102 previous assembly Cliv_1.0 (GCF_000337935.1) Unplaced Scaffold NW_004973254.1 (4338370..4433461, complement)

Chromosome 1 - NC_088602.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110358048 Neighboring gene uncharacterized LOC110358046 Neighboring gene uncharacterized LOC135578320 Neighboring gene sacsin molecular chaperone Neighboring gene uncharacterized LOC135578321

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cardiac muscle tissue development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of sarcoglycan complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
gamma-sarcoglycan
Names
Gamma-sarcoglycan

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036013475.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bColLiv1.pat.W.v2

Genomic

  1. NC_088602.1 Reference bColLiv1.pat.W.v2

    Range
    21425651..21559398
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_065050056.1 → XP_064906128.1  gamma-sarcoglycan isoform X1

  2. XM_065050034.1 → XP_064906106.1  gamma-sarcoglycan isoform X1

  3. XM_065050127.1 → XP_064906199.1  gamma-sarcoglycan isoform X2

    UniProtKB/TrEMBL
    A0A2I0MCW0

  4. XM_065050106.1 → XP_064906178.1  gamma-sarcoglycan isoform X2

    UniProtKB/TrEMBL
    A0A2I0MCW0

  5. XM_065050064.1 → XP_064906136.1  gamma-sarcoglycan isoform X1

  6. XM_065050040.1 → XP_064906112.1  gamma-sarcoglycan isoform X1

  7. XM_065050114.1 → XP_064906186.1  gamma-sarcoglycan isoform X2

    UniProtKB/TrEMBL
    A0A2I0MCW0

  8. XM_065050071.1 → XP_064906143.1  gamma-sarcoglycan isoform X1

  9. XM_065050136.1 → XP_064906208.1  gamma-sarcoglycan isoform X2

    UniProtKB/TrEMBL
    A0A2I0MCW0

  10. XM_021286235.2 → XP_021141910.1  gamma-sarcoglycan isoform X1

    Conserved Domains (1) summary
    pfam04790
    Location:25 → 283
    Sarcoglycan_1; Sarcoglycan complex subunit protein

  11. XM_065050122.1 → XP_064906194.1  gamma-sarcoglycan isoform X2

    UniProtKB/TrEMBL
    A0A2I0MCW0

  12. XM_021286237.2 → XP_021141912.1  gamma-sarcoglycan isoform X1

    Conserved Domains (1) summary
    pfam04790
    Location:25 → 283
    Sarcoglycan_1; Sarcoglycan complex subunit protein

  13. XM_065050092.1 → XP_064906164.1  gamma-sarcoglycan isoform X1

  14. XM_065050097.1 → XP_064906169.1  gamma-sarcoglycan isoform X1

Nucleotide Protein
Heading Accession and Version

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