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ACLY ATP citrate lyase [ Columba livia (rock pigeon) ]

Gene ID: 102097494, updated on 3-Aug-2024

Summary

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Gene symbol
ACLY
Gene description
ATP citrate lyase
Gene type
protein coding
RefSeq status
MODEL
Organism
Columba livia
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Columbimorphae; Columbiformes; Columbidae; Columba
Orthologs
human mouse all
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Genomic context

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See ACLY in Genome Data Viewer
Location:
chromosome: 23
Exon count:
33
Annotation release Status Assembly Chr Location
RS_2024_05 current bColLiv1.pat.W.v2 (GCF_036013475.1) 23 NC_088624.1 (1493256..1523227)
102 previous assembly Cliv_1.0 (GCF_000337935.1) Unplaced Scaffold NW_004973899.1 (274270..307310, complement)

Chromosome 23 - NC_088624.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC135576091 Neighboring gene 2',3'-cyclic nucleotide 3' phosphodiesterase Neighboring gene outer dynein arm docking complex subunit 4 Neighboring gene kelch like family member 11 Neighboring gene kelch like family member 10 Neighboring gene 5'-nucleotidase, cytosolic IIIB Neighboring gene FKBP prolyl isomerase 10

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP citrate synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in acetyl-CoA biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in citrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fatty acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tricarboxylic acid cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ATP-citrate synthase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036013475.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bColLiv1.pat.W.v2

Genomic

  1. NC_088624.1 Reference bColLiv1.pat.W.v2

    Range
    1493256..1523227
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_065039180.1 → XP_064895252.1  ATP-citrate synthase isoform X4

  2. XM_065039179.1 → XP_064895251.1  ATP-citrate synthase isoform X4

  3. XM_065039178.1 → XP_064895250.1  ATP-citrate synthase isoform X4

  4. XM_065039174.1 → XP_064895246.1  ATP-citrate synthase isoform X1

  5. XM_065039176.1 → XP_064895248.1  ATP-citrate synthase isoform X3

  6. XM_065039175.1 → XP_064895247.1  ATP-citrate synthase isoform X2

  7. XM_065039177.1 → XP_064895249.1  ATP-citrate synthase isoform X4

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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