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FREM1 FRAS1 related extracellular matrix 1 [ Columba livia (rock pigeon) ]

Gene ID: 102097462, updated on 3-Aug-2024

Summary

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Gene symbol
FREM1
Gene description
FRAS1 related extracellular matrix 1
Locus tag
A306_01439
Gene type
protein coding
RefSeq status
MODEL
Organism
Columba livia
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Columbimorphae; Columbiformes; Columbidae; Columba
Orthologs
human mouse all
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Genomic context

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See FREM1 in Genome Data Viewer
Location:
chromosome: Z
Exon count:
39
Annotation release Status Assembly Chr Location
RS_2024_05 current bColLiv1.pat.W.v2 (GCF_036013475.1) Z NC_088642.1 (63904109..63977664, complement)
102 previous assembly Cliv_1.0 (GCF_000337935.1) Unplaced Scaffold NW_004973289.1 (1288863..1362288)

Chromosome Z - NC_088642.1Genomic Context describing neighboring genes Neighboring gene zinc finger DHHC-type palmitoyltransferase 21 Neighboring gene uncharacterized LOC110359421 Neighboring gene cerberus 1, DAN family BMP antagonist Neighboring gene tetratricopeptide repeat domain 39B Neighboring gene uncharacterized LOC135577302

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in anatomical structure morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell communication IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in collagen-containing extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
FRAS1-related extracellular matrix protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036013475.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bColLiv1.pat.W.v2

Genomic

  1. NC_088642.1 Reference bColLiv1.pat.W.v2

    Range
    63904109..63977664 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021288827.2 → XP_021144502.2  FRAS1-related extracellular matrix protein 1 isoform X1

  2. XM_065046135.1 → XP_064902207.1  FRAS1-related extracellular matrix protein 1 isoform X2

  3. XM_065046134.1 → XP_064902206.1  FRAS1-related extracellular matrix protein 1 isoform X1

  4. XM_021288826.2 → XP_021144501.2  FRAS1-related extracellular matrix protein 1 isoform X1

  5. XM_021288829.2 → XP_021144504.2  FRAS1-related extracellular matrix protein 1 isoform X4

  6. XM_065046136.1 → XP_064902208.1  FRAS1-related extracellular matrix protein 1 isoform X3

RNA

  1. XR_010468994.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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