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PPP1R3B protein phosphatase 1 regulatory subunit 3B [ Columba livia (rock pigeon) ]

Gene ID: 102097455, updated on 3-Aug-2024

Summary

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Gene symbol
PPP1R3B
Gene description
protein phosphatase 1 regulatory subunit 3B
Gene type
protein coding
RefSeq status
MODEL
Organism
Columba livia
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Columbimorphae; Columbiformes; Columbidae; Columba
Orthologs
human mouse all
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Genomic context

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See PPP1R3B in Genome Data Viewer
Location:
chromosome: 4
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_05 current bColLiv1.pat.W.v2 (GCF_036013475.1) 4 NC_088605.1 (47486445..47495871)
102 previous assembly Cliv_1.0 (GCF_000337935.1) Unplaced Scaffold NW_004973242.1 (27950..33589, complement)

Chromosome 4 - NC_088605.1Genomic Context describing neighboring genes Neighboring gene prolow-density lipoprotein receptor-related protein 1-like Neighboring gene claudin 23 Neighboring gene exoribonuclease 1 Neighboring gene multifunctional ROCO family signaling regulator 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomic diversity and evolution of the head crest in the rock pigeon. Shapiro MD, et al. Science, 2013 Mar 1. PMID 23371554, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycogen binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein phosphatase 1 binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of glycogen biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of protein phosphatase type 1 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein phosphatase 1 regulatory subunit 3B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036013475.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bColLiv1.pat.W.v2

Genomic

  1. NC_088605.1 Reference bColLiv1.pat.W.v2

    Range
    47486445..47495871
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_065061501.1 → XP_064917573.1  protein phosphatase 1 regulatory subunit 3B isoform X2

    UniProtKB/TrEMBL
    A0A2I0LXS7

  2. XM_065061500.1 → XP_064917572.1  protein phosphatase 1 regulatory subunit 3B isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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