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GAL3ST2 galactose-3-O-sulfotransferase 2 [ Columba livia (rock pigeon) ]

Gene ID: 102096904, updated on 3-Aug-2024

Summary

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Gene symbol
GAL3ST2
Gene description
galactose-3-O-sulfotransferase 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Columba livia
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Columbimorphae; Columbiformes; Columbidae; Columba
Orthologs
human all
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Genomic context

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See GAL3ST2 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_05 current bColLiv1.pat.W.v2 (GCF_036013475.1) 9 NC_088610.1 (20565848..20579249)
102 previous assembly Cliv_1.0 (GCF_000337935.1) Unplaced Scaffold NW_004973255.1 (1879703..1890169)

Chromosome 9 - NC_088610.1Genomic Context describing neighboring genes Neighboring gene inhibitor of growth family member 5 Neighboring gene D-2-hydroxyglutarate dehydrogenase Neighboring gene neuraminidase 4 Neighboring gene transmembrane 4 L six family member 19 Neighboring gene UBX domain protein 7

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables galactosylceramide sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycoprotein biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
galactose-3-O-sulfotransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036013475.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bColLiv1.pat.W.v2

Genomic

  1. NC_088610.1 Reference bColLiv1.pat.W.v2

    Range
    20565848..20579249
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005501612.3 → XP_005501669.1  galactose-3-O-sulfotransferase 2 isoform X1

    UniProtKB/TrEMBL
    A0A2I0LUV2
    Conserved Domains (1) summary
    cl22970
    Location:18 → 388
    Sulfotransfer_2; Sulfotransferase family

  2. XM_021286414.2 → XP_021142089.1  galactose-3-O-sulfotransferase 2 isoform X2

    Conserved Domains (1) summary
    cl22970
    Location:10 → 380
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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